RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 A0A0A6YYK5 440 aaPredicted RBP8.79□□□□□ -1
GTF2A1-203ENST00000553612 GATBO75879 557 aaKnown RBP8.79□□□□□ -1
GTF2A1-203ENST00000553612 SNRNP70P08621 437 aaKnown RBP8.79□□□□□ -1
GTF2A1-203ENST00000553612 HOXB1P14653 301 aaPredicted RBP8.79□□□□□ -1
GTF2A1-203ENST00000553612 HDCP19113 662 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 ZP3P21754 424 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 NKX6-1P78426 367 aaPredicted RBP8.79□□□□□ -1
GTF2A1-203ENST00000553612 MGAT3Q09327 533 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 IRF4Q15306 451 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 HEPHL1Q6MZM0 1159 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 RBMS3Q6XE24 437 aaKnown RBP8.79□□□□□ -1
GTF2A1-203ENST00000553612 DNAAF1Q8NEP3 725 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 MRPL45Q9BRJ2 306 aaKnown RBP8.79□□□□□ -1
GTF2A1-203ENST00000553612 TTLL2Q9BWV7 592 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 FGFBP2Q9BYJ0 223 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 DENND4BO75064 1496 aaPredicted RBP8.79□□□□□ -1
GTF2A1-203ENST00000553612 ZNF432O94892 652 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 NDUFB10O96000 172 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 IFNA17P01571 189 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 STSP08842 583 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 ABHD2P08910 425 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 ARSDP51689 593 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 MXD4Q14582 209 aaPredicted RBP8.78□□□□□ -1
GTF2A1-203ENST00000553612 BAK1Q16611 211 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 TSTQ16762 297 aaKnown RBP8.78□□□□□ -1
GTF2A1-203ENST00000553612 LRRC26Q2I0M4 334 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 ZNF789Q5FWF6 425 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 PIK3R6Q5UE93 754 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 CMTR2Q8IYT2 770 aaKnown RBP8.78□□□□□ -1
GTF2A1-203ENST00000553612 SVBPQ8N300 66 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 C1orf52Q8N6N3 182 aaKnown RBP8.78□□□□□ -1
GTF2A1-203ENST00000553612 ZNF596Q8TC21 504 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 ZFP3Q96NJ6 502 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 MYOCQ99972 504 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 MINDY3Q9H8M7 445 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 SIRT7Q9NRC8 400 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 DUSP22Q9NRW4 184 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 TMEM248Q9NWD8 314 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 SIRT5Q9NXA8 310 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 TMEM59LQ9UK28 342 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 RPS10-NUDT3A0A1W2PQS6 291 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 KANTRA0A1W2PQU2 76 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 MFSD2BA6NFX1 497 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 USP17L10C9JJH3 530 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 BCAS2O75934 225 aaPredicted RBP8.78□□□□□ -1
GTF2A1-203ENST00000553612 LINC00032P0C843 101 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 SOAT1P35610 550 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 RPS10P46783 165 aaKnown RBP8.78□□□□□ -1
GTF2A1-203ENST00000553612 ANXA11P50995 505 aaKnown RBP8.78□□□□□ -1
GTF2A1-203ENST00000553612 STXBP1P61764 594 aaKnown RBP8.78□□□□□ -1
GTF2A1-203ENST00000553612 CEACAM7Q14002 265 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 SPANXN3Q5MJ09 141 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 CENPPQ6IPU0 288 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 MZT2AQ6P582 158 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 CARM1Q86X55 608 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 NLNQ9BYT8 704 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 GPN2Q9H9Y4 310 aaPredicted RBP8.78□□□□□ -1
GTF2A1-203ENST00000553612 ADAM28Q9UKQ2 775 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 HCN2Q9UL51 889 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 ATP10BO94823 1461 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 FLT4P35916 1363 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 F8VP50 259 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 AGPAT2O15120 278 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 PROM1O43490 865 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 LILRB3O75022 631 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 EPOP01588 193 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 CHRNGP07510 517 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 SPP1P10451 314 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 ACPPP15309 386 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 PCSK2P16519 638 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 CHRNB2P17787 502 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 GCGRP47871 477 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 CDH17Q12864 832 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 LEXMQ3ZCV2 418 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 COMTD1Q86VU5 262 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 POLR1EQ9GZS1 481 aaKnown RBP8.78□□□□□ -1
GTF2A1-203ENST00000553612 MID1IP1Q9NPA3 183 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 POT1Q9NUX5 634 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 TMEM45AQ9NWC5 275 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 ANKUB1A6NFN9 424 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 NPM3O75607 178 aaKnown RBP8.78□□□□□ -1
GTF2A1-203ENST00000553612 SMIM6P0DI80 62 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 BTF3P20290 206 aaKnown RBP8.78□□□□□ -1
GTF2A1-203ENST00000553612 PROZP22891 400 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 PER3P56645 1201 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 ZNF234Q14588 700 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 ZNF273Q14593 569 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 DMRTA1Q5VZB9 504 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 OR4D6Q8NGJ1 314 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 CHTF18Q8WVB6 975 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 C18orf25Q96B23 403 aaPredicted RBP8.78□□□□□ -1
GTF2A1-203ENST00000553612 C12orf66Q96MD2 445 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 RBBP8Q99708 897 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 DNAJB9Q9UBS3 223 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 SALL1Q9NSC2 1324 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 A0A0A6YYJ9 748 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.78□□□□□ -1
GTF2A1-203ENST00000553612 PTBP3O95758 552 aaKnown RBP8.78□□□□□ -1
GTF2A1-203ENST00000553612 CD48P09326 243 aa8.78□□□□□ -1
GTF2A1-203ENST00000553612 HTR2AP28223 471 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms