RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 CTSVO60911 334 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 CCNDBP1O95273 360 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 SLU7O95391 586 aaKnown RBP9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 SLC16A8O95907 504 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ONECUT2O95948 504 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 C8GP07360 202 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PLA2G2AP14555 144 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PMS2P54278 862 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 CDKN2DP55273 166 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 VSX2P58304 361 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 IL2P60568 153 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 YBX1P67809 324 aaKnown RBP9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ABATP80404 500 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 TAP2Q03519 686 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 MGAT5Q09328 741 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 CALCOCO2Q13137 446 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 IL10RAQ13651 578 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 SSPNQ14714 243 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 NKAIN1Q4KMZ8 207 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 RBM20Q5T481 1227 aaKnown RBP9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ICE2Q659A1 982 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 TRMT10BQ6PF06 316 aaKnown RBP9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 FAM198BQ6UWH4 519 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 TTLL10Q6ZVT0 673 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PIWIL4Q7Z3Z4 852 aaKnown RBP9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 TTC29Q8NA56 475 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 FBXO36Q8NEA4 188 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 C9orf43Q8TAL5 461 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ADAMTS17Q8TE56 1095 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ZNF480Q8WV37 535 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 CCDC138Q96M89 665 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PARVBQ9HBI1 364 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ZNF71Q9NQZ8 489 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 MOCS1Q9NZB8 636 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 IFT80Q9P2H3 777 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ANKMY1Q9P2S6 941 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 NDOR1Q9UHB4 597 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 TLK1Q9UKI8 766 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PADI2Q9Y2J8 665 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 LOC105369274A0A096LPK9 316 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 LOC102723532A0A0G2JNH3 316 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 A0A0J9YVX5 310 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 HYKKA2RU49 373 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 OR2A25A4D2G3 310 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 CTAGE15A4D2H0 777 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 DSCR3O14972 297 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 EIF3HO15372 352 aaKnown RBP eCLIP9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 SUV39H1O43463 412 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 RAD51CO43502 376 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 RFPL1O75677 317 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 KLF7O75840 302 aaPredicted RBP9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 HIST1H2AGP0C0S8 130 aaPredicted RBP9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 CTAGE8P0CG41 777 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 HIST1H2ADP20671 130 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 NFKB2Q00653 900 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 RELAQ04206 551 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 C2orf54Q08AI8 447 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 THEMIS2Q5TEJ8 643 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 HECTD2Q5U5R9 776 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 FAM69BQ5VUD6 431 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 DUPD1Q68J44 220 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 FRMPD2BQ6IN97 320 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 FAM45BPQ6NSW5 357 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 MRPL14Q6P1L8 145 aaKnown RBP9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 RNF44Q7L0R7 432 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 OVCH1Q7RTY7 1134 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 STRA8Q7Z7C7 330 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 CTAGE6Q86UF2 777 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PAQR7Q86WK9 346 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PTRH1Q86Y79 214 aaKnown RBP9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 RAB43Q86YS6 212 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 CTAGE4Q8IX94 777 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 LRRC56Q8IYG6 542 aaPredicted RBP9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ZBED8Q8IZ13 594 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 OR4N4Q8N0Y3 316 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 MYO1HQ8N1T3 1032 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 GPATCH11Q8N954 259 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PPFIBP2Q8ND30 876 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PRR7Q8TB68 274 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 FAM45AQ8TCE6 357 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PYROXD1Q8WU10 500 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PTERQ96BW5 349 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PDLIM5Q96HC4 596 aaKnown RBP9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 HIST1H2AHQ96KK5 128 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 IP6K3Q96PC2 410 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 HIST1H2AJQ99878 128 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PLCD4Q9BRC7 762 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 WDR83Q9BRX9 315 aaKnown RBP9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 H2AFJQ9BTM1 129 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 TRIM54Q9BYV2 358 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PCBD2Q9H0N5 130 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ING2Q9H160 280 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 DPH5Q9H2P9 285 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 CUTCQ9NTM9 273 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 NSMCE4AQ9NXX6 385 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ZFATQ9P243 1243 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ADAMTS6Q9UKP5 1117 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PDE10AQ9Y233 779 aa9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 UTP11Q9Y3A2 253 aaKnown RBP9.31□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PTRH2Q9Y3E5 179 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms