RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 FOXC1Q12948 553 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 PDIA2Q13087 525 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 THOC5Q13769 683 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 NR1D2Q14995 579 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 TYSND1Q2T9J0 566 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 CCDC157Q569K6 752 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 HSP90AA5PQ58FG0 334 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 IGSF11Q5DX21 431 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 SPANXN3Q5MJ09 141 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 HP1BP3Q5SSJ5 553 aaPredicted RBP6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 LCE2CQ5TA81 110 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 THEMIS2Q5TEJ8 643 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 C8orf74Q6P047 294 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 ZDHHC24Q6UX98 284 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 CENPUQ71F23 418 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 TBC1D1Q86TI0 1168 aaPredicted RBP6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 TMPRSS12Q86WS5 348 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 LRRC6Q86X45 466 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 CILP2Q8IUL8 1156 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 UNC5BQ8IZJ1 945 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 GALNT15Q8N3T1 639 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 NOA1Q8NC60 698 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 CEP70Q8NHQ1 597 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 CDC26Q8NHZ8 85 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 WDR48Q8TAF3 677 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 SLC22A8Q8TCC7 542 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 UTP15Q8TED0 518 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 SLC37A2Q8TED4 501 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 ARL5BQ96KC2 179 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 BIRC8Q96P09 236 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 WDR83Q9BRX9 315 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 CARD6Q9BX69 1037 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 WNT5BQ9H1J7 359 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 OSGEPL1Q9H4B0 414 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 PLAC1Q9HBJ0 212 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 SARS2Q9NP81 518 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 EMC7Q9NPA0 242 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 C20orf96Q9NUD7 363 aaPredicted RBP6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 C14orf119Q9NWQ9 140 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 PDP2Q9P2J9 529 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 CPNE7Q9UBL6 633 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 PTBP2Q9UKA9 531 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 CORINQ9Y5Q5 1042 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 ZNF106Q9H2Y7 1883 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 MYLKQ15746 1914 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 PLXNB3Q9ULL4 1909 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 SPTBN4Q9H254 2564 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 A0A1W2PQM1 296 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 SLC5A10A0PJK1 596 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 HTR3EA5X5Y0 456 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 RHPN2P1A8MT19 583 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 IQCF5A8MTL0 148 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 PDZK1P1A8MUH7 402 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 E2F3O00716 465 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 LIN7AO14910 233 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 CASC3O15234 703 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 EIF3HO15372 352 aaKnown RBP eCLIP6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 HDAC3O15379 428 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 HYAL3O43820 417 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 DNAJA2O60884 412 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 SEC24DO94855 1032 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 HAUS5O94927 633 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 VIPP01282 170 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 FTH1P02794 183 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 ERVK-10P10266 1014 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 JUPP14923 745 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 DDX5P17844 614 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 PRKACBP22694 351 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 RPS3P23396 243 aaKnown RBP eCLIP6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 PDHA2P29803 388 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 ALDH4A1P30038 563 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 CCR7P32248 378 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 SOX18P35713 384 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 OR1D5P58170 312 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 UBE2IP63279 158 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 CCL7P80098 99 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 SHC2P98077 582 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 OCRLQ01968 901 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 PLOD1Q02809 727 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 GUCY2DQ02846 1103 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 HSPA14Q0VDF9 509 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 RPA4Q13156 261 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 CTBP1Q13363 440 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 FRG1Q14331 258 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 ZNF267Q14586 743 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 FASTKD3Q14CZ7 662 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 PPA1Q15181 289 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 MAPRE2Q15555 327 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 RPE65Q16518 533 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 ZNF789Q5FWF6 425 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 WIPI1Q5MNZ9 446 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 TEDDM1Q5T9Z0 273 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 NDUFAF5Q5TEU4 345 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 STEAP4Q687X5 459 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 TUBA3EQ6PEY2 450 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 CYS1Q717R9 158 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 MAMDC2Q7Z304 686 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 GPR155Q7Z3F1 870 aa6.09□□□□□ -1.43
ATPAF1-209ENST00000529214 KCNMB4Q86W47 210 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms