RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 PGM3O95394 542 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 TNFRSF6BO95407 300 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 IGKV2-30P06310 120 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 IFIT1P09914 478 aaKnown RBP4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 ALDOCP09972 364 aaKnown RBP4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 UQCRFS1P1P0C7P4 283 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 CLUP10909 449 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 CHRNA5P30532 468 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 RFC1P35251 1148 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 SERPINB5P36952 375 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 PAFAH1B1P43034 410 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 GRK6P43250 576 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 NR4A2P43354 598 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 NPY2RP49146 381 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 POU3F4P49335 361 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 HOXA1P49639 335 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 NT5C2P49902 561 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 SLC26A2P50443 739 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 DCDC1P59894 354 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 YWHAEP62258 255 aaKnown RBP4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 KCNJ10P78508 379 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 CDK16Q00536 496 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 FLI1Q01543 452 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 UBE3AQ05086 875 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 CALCOCO2Q13137 446 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 TBX2Q13207 712 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 FASTKD3Q14CZ7 662 aaKnown RBP4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 KARSQ15046 597 aaKnown RBP4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 PPA1Q15181 289 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 TRADDQ15628 312 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 BTBD16Q32M84 506 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 KCTD21Q4G0X4 260 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 AARDQ4LEZ3 155 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 RUNDC3AQ59EK9 446 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 TEX30Q5JUR7 227 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 DUPD1Q68J44 220 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 XKRXQ6PP77 449 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 GALNT5Q7Z7M9 940 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 ADGRG6Q86SQ4 1221 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 ASPGQ86U10 573 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 RALGPS2Q86X27 583 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 WDR49Q8IV35 697 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 CDKL3Q8IVW4 592 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 ICA1LQ8NDH6 482 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 CATSPER1Q8NEC5 780 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 IPMKQ8NFU5 416 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 OR6Y1Q8NGX8 325 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 LRRC20Q8TCA0 184 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 AGR3Q8TD06 166 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 SETD7Q8WTS6 366 aaKnown RBP4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 TRUB1Q8WWH5 349 aaKnown RBP4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 PHF21AQ96BD5 680 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 TUBGCP3Q96CW5 907 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 MASTLQ96GX5 879 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 TXNDC15Q96J42 360 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 PLEKHA8Q96JA3 519 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 DNAJC1Q96KC8 554 aaKnown RBP4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 AK8Q96MA6 479 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 ZNF317Q96PQ6 595 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 PLIN2Q99541 437 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 NPAS1Q99742 590 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 ECSITQ9BQ95 431 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 C17orf62Q9BQA9 187 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 LLPHQ9BRT6 129 aaKnown RBP4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 CNPY3Q9BT09 278 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 NUP85Q9BW27 656 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 HEMGNQ9BXL5 484 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 MYLK2Q9H1R3 596 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 CUEDC2Q9H467 287 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 RNF41Q9H4P4 317 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 TFB2MQ9H5Q4 396 aaKnown RBP4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 TLE6Q9H808 572 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 FZD3Q9NPG1 666 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 TIGARQ9NQ88 270 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 PRDM8Q9NQV8 689 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 KLHL1Q9NR64 748 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 SMYD2Q9NRG4 433 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 INTS10Q9NVR2 710 aaKnown RBP4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 NDE1Q9NXR1 346 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 NKIRAS2Q9NYR9 191 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 NCKIPSDQ9NZQ3 722 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 CYB5R1Q9UHQ9 305 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 CYTH4Q9UIA0 394 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 TRMT6Q9UJA5 497 aaKnown RBP4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 SLC25A13Q9UJS0 675 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 ENTPD4Q9Y227 616 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 PRELID3BQ9Y3B1 194 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 COPG1Q9Y678 874 aaKnown RBP4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 PKD1L3Q7Z443 1732 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 PARP4Q9UKK3 1724 aaKnown RBP4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 ZNF532Q9HCE3 1301 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 KCPQ6ZWJ8 1503 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 A0A0U1RQJ8 604 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 ZSCAN5CA6NGD5 496 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 ZNF233A6NK53 670 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 MCIDASD6RGH6 385 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 M0QZQ0 153 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 ADAM10O14672 748 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 CAPN9O14815 690 aa4.53□□□□□ -1.68
HMGB3P13-201ENST00000511263 KRT86O43790 486 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms