RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 GRK3P35626 688 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 MAGEA12P43365 314 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 ABHD18Q0P651 414 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 OR4D1Q15615 310 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 TSNAXIP1Q2TAA8 658 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 DEFB110Q30KQ9 67 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 MANEAQ5SRI9 462 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 YOD1Q5VVQ6 348 aaPredicted RBP14.39□□□□□ -0.11
RNF4-210ENST00000508235 ZNF425Q6IV72 752 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 TIFABQ6ZNK6 161 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 RNF44Q7L0R7 432 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 ADCK2Q7Z695 626 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 LCA5Q86VQ0 697 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 PAQR7Q86WK9 346 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 CENPLQ8N0S6 344 aaPredicted RBP14.39□□□□□ -0.11
RNF4-210ENST00000508235 AENQ8WTP8 325 aaKnown RBP14.39□□□□□ -0.11
RNF4-210ENST00000508235 KCTD4Q8WVF5 259 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 CAVIN3Q969G5 261 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 PTERQ96BW5 349 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 NXNL1Q96CM4 212 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 CLIP3Q96DZ5 547 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 CCNL2Q96S94 520 aaPredicted RBP14.39□□□□□ -0.11
RNF4-210ENST00000508235 SELENOSQ9BQE4 189 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 PARD6BQ9BYG5 372 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 ALG9Q9H6U8 611 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 ACTR5Q9H9F9 607 aaPredicted RBP14.39□□□□□ -0.11
RNF4-210ENST00000508235 WDR70Q9NW82 654 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 NUDT4Q9NZJ9 180 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 CD274Q9NZQ7 290 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 PADI1Q9ULC6 663 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 DYRK1BQ9Y463 629 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 KCNE2Q9Y6J6 123 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 AKAP13Q12802 2813 aa14.39□□□□□ -0.11
RNF4-210ENST00000508235 ACACAQ13085 2346 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 NCF1BA6NI72 391 aaPredicted RBP14.38□□□□□ -0.11
RNF4-210ENST00000508235 NCF1CA8MVU1 366 aaPredicted RBP14.38□□□□□ -0.11
RNF4-210ENST00000508235 TXNDC9O14530 226 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 CTSVO60911 334 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 RBP1P09455 135 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 NCF1P14598 390 aaPredicted RBP14.38□□□□□ -0.11
RNF4-210ENST00000508235 NPPBP16860 134 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 ZNF28P17035 718 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 GCAP28676 217 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 HSD17B3P37058 310 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 ARSFP54793 590 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 TLE3Q04726 772 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 DLG1Q12959 904 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 GRM7Q14831 915 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 RASA2Q15283 850 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 PTCHD3Q3KNS1 767 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 THOC6Q86W42 341 aaKnown RBP14.38□□□□□ -0.11
RNF4-210ENST00000508235 KLHDC8AQ8IYD2 350 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 TBC1D19Q8N5T2 526 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 TTC29Q8NA56 475 aaPredicted RBP14.38□□□□□ -0.11
RNF4-210ENST00000508235 GALNT6Q8NCL4 622 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 PDPRQ8NCN5 879 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 RERGQ96A58 199 aaPredicted RBP14.38□□□□□ -0.11
RNF4-210ENST00000508235 PYCR2Q96C36 320 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 DPH2Q9BQC3 489 aaPredicted RBP14.38□□□□□ -0.11
RNF4-210ENST00000508235 NDC1Q9BTX1 674 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 CAPS2Q9BXY5 557 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 ENAMQ9NRM1 1142 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 WWOXQ9NZC7 414 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 RAB21Q9UL25 225 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 SSUH2Q9Y2M2 353 aa14.38□□□□□ -0.11
RNF4-210ENST00000508235 MDC1Q14676 2089 aaKnown RBP14.37□□□□□ -0.11
RNF4-210ENST00000508235 IGKV1-8A0A0C4DH67 115 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 A0A0J9YVX5 310 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 SUPT3HB4E1H0 165 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 H7BY64 318 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 ZNF749O43361 778 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 SUPT3HO75486 399 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 WDR47O94967 919 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 NTRK1P04629 796 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 GGT5P36269 586 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 STAT5AP42229 794 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 CCR8P51685 355 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 TMPRSS3P57727 454 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 RPS15AP62244 130 aaKnown RBP14.37□□□□□ -0.11
RNF4-210ENST00000508235 YBX1P67809 324 aaKnown RBP14.37□□□□□ -0.11
RNF4-210ENST00000508235 IRF9Q00978 393 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 TGIF1Q15583 401 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 FAM214AQ32MH5 1076 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 FBXO42Q6P3S6 717 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 TIPARPQ7Z3E1 657 aaKnown RBP14.37□□□□□ -0.11
RNF4-210ENST00000508235 TDRPQ86YL5 185 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 ZSCAN1Q8NBB4 408 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 ABHD11Q8NFV4 315 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 PROKR1Q8TCW9 393 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 ACMSDQ8TDX5 336 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 EXT2Q93063 718 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 THAP11Q96EK4 314 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 PRAP1Q96NZ9 151 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 ATOH8Q96SQ7 321 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 NLNQ9BYT8 704 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 FAM117AQ9C073 453 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 SPRTNQ9H040 489 aaPredicted RBP14.37□□□□□ -0.11
RNF4-210ENST00000508235 GPN2Q9H9Y4 310 aaPredicted RBP14.37□□□□□ -0.11
RNF4-210ENST00000508235 LHX9Q9NQ69 397 aa14.37□□□□□ -0.11
RNF4-210ENST00000508235 TXLNGQ9NUQ3 528 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms