RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 ZFATQ9P243 1243 aa12.34□□□□□ -0.43
HDAC1-209ENST00000484305 STOX2Q9P2F5 926 aaPredicted RBP12.34□□□□□ -0.43
HDAC1-209ENST00000484305 TP53TG5Q9Y2B4 290 aa12.34□□□□□ -0.43
HDAC1-209ENST00000484305 PADI2Q9Y2J8 665 aa12.34□□□□□ -0.43
HDAC1-209ENST00000484305 VWA7Q9Y334 891 aa12.34□□□□□ -0.43
HDAC1-209ENST00000484305 PTRH2Q9Y3E5 179 aaKnown RBP12.34□□□□□ -0.43
HDAC1-209ENST00000484305 HYKKA2RU49 373 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 J3QKU1 62 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 NDC80O14777 642 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 EIF2S1P05198 315 aaKnown RBP12.33□□□□□ -0.44
HDAC1-209ENST00000484305 C8GP07360 202 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 OTX2P32243 289 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 FOLR3P41439 243 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 CCL11P51671 97 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 IL2P60568 153 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 CALCOCO2Q13137 446 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 PDAP1Q13442 181 aaKnown RBP12.33□□□□□ -0.44
HDAC1-209ENST00000484305 ATP1A4Q13733 1029 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 SSPNQ14714 243 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 NAA25Q14CX7 972 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 PHKG1Q16816 387 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 THEMIS2Q5TEJ8 643 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 YOD1Q5VVQ6 348 aaPredicted RBP12.33□□□□□ -0.44
HDAC1-209ENST00000484305 ZNF425Q6IV72 752 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 FAM45BPQ6NSW5 357 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 TCTN3Q6NUS6 607 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 COX15Q7KZN9 410 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 ZC3HC1Q86WB0 502 aaKnown RBP12.33□□□□□ -0.44
HDAC1-209ENST00000484305 PAQR7Q86WK9 346 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 PALM2Q8IXS6 379 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 MYO1HQ8N1T3 1032 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 METTL27Q8N6F8 245 aaPredicted RBP12.33□□□□□ -0.44
HDAC1-209ENST00000484305 FAM45AQ8TCE6 357 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 CCDC138Q96M89 665 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 PARVBQ9HBI1 364 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 ACSS2Q9NR19 701 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 CUEDC1Q9NWM3 386 aaPredicted RBP12.33□□□□□ -0.44
HDAC1-209ENST00000484305 ANKMY1Q9P2S6 941 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 CORO1CQ9ULV4 474 aaPredicted RBP12.33□□□□□ -0.44
HDAC1-209ENST00000484305 NUP210LQ5VU65 1888 aa12.33□□□□□ -0.44
HDAC1-209ENST00000484305 H0YGG7 62 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 SLC16A5O15375 505 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 PIAS1O75925 651 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 CCNDBP1O95273 360 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 ONECUT2O95948 504 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 PDGFAP04085 211 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 UMODP07911 640 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 CD63P08962 238 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 SSTR1P30872 391 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 OR1D4P47884 311 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 ARF3P61204 181 aaPredicted RBP12.32□□□□□ -0.44
HDAC1-209ENST00000484305 TBPL1P62380 186 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 SP140Q13342 867 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 TRADDQ15628 312 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 FAM214AQ32MH5 1076 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 COLEC12Q5KU26 742 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 TMEM207Q6UWW9 146 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 ATG14Q6ZNE5 492 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 OVCH1Q7RTY7 1134 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 ZNF572Q7Z3I7 529 aaPredicted RBP12.32□□□□□ -0.44
HDAC1-209ENST00000484305 STRA8Q7Z7C7 330 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 RAB43Q86YS6 212 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 OR2Y1Q8NGV0 311 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 PYROXD1Q8WU10 500 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 OR2A5Q96R48 311 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 TRIM4Q9C037 500 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 ATG10Q9H0Y0 220 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 SAYSD1Q9NPB0 183 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 CCDC177Q9NQR7 707 aaPredicted RBP12.32□□□□□ -0.44
HDAC1-209ENST00000484305 SMYD2Q9NRG4 433 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 SH2B3Q9UQQ2 575 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 MAU2Q9Y6X3 613 aa12.32□□□□□ -0.44
HDAC1-209ENST00000484305 H7BY64 318 aa12.31□□□□□ -0.44
HDAC1-209ENST00000484305 HAT1O14929 419 aa12.31□□□□□ -0.44
HDAC1-209ENST00000484305 PIM1P11309 404 aaPredicted RBP12.31□□□□□ -0.44
HDAC1-209ENST00000484305 EZRP15311 586 aaKnown RBP12.31□□□□□ -0.44
HDAC1-209ENST00000484305 SAT1P21673 171 aa12.31□□□□□ -0.44
HDAC1-209ENST00000484305 ABATP80404 500 aa12.31□□□□□ -0.44
HDAC1-209ENST00000484305 NAE1Q13564 534 aa12.31□□□□□ -0.44
HDAC1-209ENST00000484305 NKG7Q16617 165 aa12.31□□□□□ -0.44
HDAC1-209ENST00000484305 ZXDCQ2QGD7 858 aaPredicted RBP12.31□□□□□ -0.44
HDAC1-209ENST00000484305 HKDC1Q2TB90 917 aa12.31□□□□□ -0.44
HDAC1-209ENST00000484305 PRTGQ2VWP7 1150 aa12.31□□□□□ -0.44
HDAC1-209ENST00000484305 PRAMEF13Q5VWM6 474 aa12.31□□□□□ -0.44
HDAC1-209ENST00000484305 AGTRAPQ6RW13 159 aa12.31□□□□□ -0.44
HDAC1-209ENST00000484305 ASB18Q6ZVZ8 466 aa12.31□□□□□ -0.44
HDAC1-209ENST00000484305 MED25Q71SY5 747 aa12.31□□□□□ -0.44
HDAC1-209ENST00000484305 ADCK2Q7Z695 626 aa12.31□□□□□ -0.44
HDAC1-209ENST00000484305 MRGPREQ86SM8 312 aa12.31□□□□□ -0.44
HDAC1-209ENST00000484305 SLC26A11Q86WA9 606 aa12.31□□□□□ -0.44
HDAC1-209ENST00000484305 PLD3Q8IV08 490 aa12.31□□□□□ -0.44
HDAC1-209ENST00000484305 TMEM102Q8N9M5 508 aaPredicted RBP12.31□□□□□ -0.44
HDAC1-209ENST00000484305 FKBP10Q96AY3 582 aa12.31□□□□□ -0.44
HDAC1-209ENST00000484305 PTERQ96BW5 349 aa12.31□□□□□ -0.44
HDAC1-209ENST00000484305 C10orf90Q96M02 699 aa12.31□□□□□ -0.44
HDAC1-209ENST00000484305 C16orf45Q96MC5 204 aaPredicted RBP12.31□□□□□ -0.44
HDAC1-209ENST00000484305 PRAP1Q96NZ9 151 aa12.31□□□□□ -0.44
HDAC1-209ENST00000484305 MCMBPQ9BTE3 642 aa12.31□□□□□ -0.44
HDAC1-209ENST00000484305 CTSFQ9UBX1 484 aa12.31□□□□□ -0.44
HDAC1-209ENST00000484305 IKZF3Q9UKT9 509 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms