RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 SLC52A3Q9NQ40 469 aa2.04□□□□□ -2.08
ITGB1-213ENST00000484088 GSN-AS1Q9NRJ2 163 aa2.04□□□□□ -2.08
ITGB1-213ENST00000484088 TXLNGQ9NUQ3 528 aa2.04□□□□□ -2.08
ITGB1-213ENST00000484088 P4HTMQ9NXG6 502 aa2.04□□□□□ -2.08
ITGB1-213ENST00000484088 SNX7Q9UNH6 387 aa2.04□□□□□ -2.08
ITGB1-213ENST00000484088 PYGO1Q9Y3Y4 419 aa2.04□□□□□ -2.08
ITGB1-213ENST00000484088 RPGRIP1LQ68CZ1 1315 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 IGSF1Q8N6C5 1336 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 CENPJQ9HC77 1338 aaPredicted RBP2.03□□□□□ -2.08
ITGB1-213ENST00000484088 PRSS46E5RG02 174 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 FPGTO14772 594 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 APOHP02749 345 aaPredicted RBP2.03□□□□□ -2.08
ITGB1-213ENST00000484088 ANKRD34CP0C6C1 535 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 NEFHP12036 1026 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 EEF2P13639 858 aaKnown RBP2.03□□□□□ -2.08
ITGB1-213ENST00000484088 F3P13726 295 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 DARSP14868 501 aaKnown RBP2.03□□□□□ -2.08
ITGB1-213ENST00000484088 ANOS1P23352 680 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 EEF1B2P24534 225 aaKnown RBP2.03□□□□□ -2.08
ITGB1-213ENST00000484088 ALDH1B1P30837 517 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 OR1D5P58170 312 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 NFE2L1Q14494 772 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 CDC37Q16543 378 aaPredicted RBP2.03□□□□□ -2.08
ITGB1-213ENST00000484088 PDLIM3Q53GG5 364 aaPredicted RBP2.03□□□□□ -2.08
ITGB1-213ENST00000484088 ASPRV1Q53RT3 343 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 C9orf50Q5SZB4 431 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 OR4A47Q6IF82 309 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 KRTAP5-1Q6L8H4 278 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 SLC25A47Q6Q0C1 308 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 MOXD1Q6UVY6 613 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 GET4Q7L5D6 327 aaPredicted RBP2.03□□□□□ -2.08
ITGB1-213ENST00000484088 SLC26A9Q7LBE3 791 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 LCA5Q86VQ0 697 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 NR2C2APQ86WQ0 139 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 CREBRFQ8IUR6 639 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 EGFL6Q8IUX8 553 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 KIRREL3Q8IZU9 778 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 TTC30BQ8N4P2 665 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 UXS1Q8NBZ7 420 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 KBTBD8Q8NFY9 601 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 OR10V1Q8NGI7 309 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 OR1L3Q8NH93 324 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 FAM76AQ8TAV0 307 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 SETD6Q8TBK2 473 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 LRRC8CQ8TDW0 803 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 SEPT1Q8WYJ6 367 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 DNASE1L2Q92874 299 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 RIT1Q92963 219 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 PTP4A1Q93096 173 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 STAMBPL1Q96FJ0 436 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 C4orf45Q96LM5 186 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 C10orf90Q96M02 699 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 CFAP53Q96M91 514 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 GDAP1L1Q96MZ0 367 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 FAM218AQ96MZ4 157 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 INPP4AQ96PE3 977 aaPredicted RBP2.03□□□□□ -2.08
ITGB1-213ENST00000484088 UHRF2Q96PU4 802 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 CITED2Q99967 270 aaPredicted RBP2.03□□□□□ -2.08
ITGB1-213ENST00000484088 ACTL8Q9H568 366 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 ZNF696Q9H7X3 374 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 UPF2Q9HAU5 1272 aaKnown RBP2.03□□□□□ -2.08
ITGB1-213ENST00000484088 RAVER2Q9HCJ3 691 aaKnown RBP2.03□□□□□ -2.08
ITGB1-213ENST00000484088 XAB2Q9HCS7 855 aaKnown RBP2.03□□□□□ -2.08
ITGB1-213ENST00000484088 FAM207AQ9NSI2 230 aaPredicted RBP2.03□□□□□ -2.08
ITGB1-213ENST00000484088 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.03□□□□□ -2.08
ITGB1-213ENST00000484088 FAM118AQ9NWS6 357 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 RNF186Q9NXI6 227 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 FLRT3Q9NZU0 649 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 RAI14Q9P0K7 980 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 CDH7Q9ULB5 785 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 PPP2R2CQ9Y2T4 447 aa2.03□□□□□ -2.08
ITGB1-213ENST00000484088 HBS1LQ9Y450 684 aaKnown RBP2.03□□□□□ -2.08
ITGB1-213ENST00000484088 SPATA31D1Q6ZQQ2 1576 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 SYNRGQ9UMZ2 1314 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 ANKRD61A6NGH8 418 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 C17orf105B2RV13 164 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 F8VVB4 439 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 F8VWA3 439 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 H0YAE9 185 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 BLOC1S5-TXNDC5H3BN57 136 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 IFIT3O14879 490 aaKnown RBP2.02□□□□□ -2.09
ITGB1-213ENST00000484088 FLRT2O43155 660 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 PPIP5K2O43314 1243 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 GRID2O43424 1007 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 GLRA3O75311 464 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 VTNP04004 478 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 FAM200BP0CF97 657 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 SPP1P10451 314 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 DLATP10515 647 aaKnown RBP2.02□□□□□ -2.09
ITGB1-213ENST00000484088 CEACAM1P13688 526 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 CDH3P22223 829 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 TCEA1P23193 301 aaKnown RBP2.02□□□□□ -2.09
ITGB1-213ENST00000484088 CASQ1P31415 396 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 TCF7P36402 384 aaPredicted RBP2.02□□□□□ -2.09
ITGB1-213ENST00000484088 CSNK2BP67870 215 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 MAP2K1Q02750 393 aaPredicted RBP2.02□□□□□ -2.09
ITGB1-213ENST00000484088 SRSF9Q13242 221 aaKnown RBP eCLIP2.02□□□□□ -2.09
ITGB1-213ENST00000484088 TRA2AQ13595 282 aaKnown RBP eCLIP2.02□□□□□ -2.09
ITGB1-213ENST00000484088 PTK6Q13882 451 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 RBM39Q14498 530 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms