RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 EDEM3Q9BZQ6 932 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 ZMYND12Q9H0C1 365 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 BOLA2Q9H3K6 86 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 CUEDC2Q9H467 287 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 TMEM165Q9HC07 324 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 KCNMB3Q9NPA1 279 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 ABCF3Q9NUQ8 709 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 PANK4Q9NVE7 773 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 FGFR1OP2Q9NVK5 253 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 MCM9Q9NXL9 1143 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 NDE1Q9NXR1 346 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 TRIM10Q9UDY6 481 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 LRWD1Q9UFC0 647 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 FBXL5Q9UKA1 691 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 PLAGL1Q9UM63 463 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 FAF1Q9UNN5 650 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 SATB2Q9UPW6 733 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 LOXL2Q9Y4K0 774 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 TMEM184BQ9Y519 407 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 SNX9Q9Y5X1 595 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 MARF1Q9Y4F3 1742 aaKnown RBP4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 CAMTA1Q9Y6Y1 1673 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 RGPD8O14715 1765 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 MAST2Q6P0Q8 1798 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 RGPD5Q99666 1765 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 SCN11AQ9UI33 1791 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 RICTORQ6R327 1708 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 PKD1L3Q7Z443 1732 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 ADGRA3Q8IWK6 1321 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 IGSF1Q8N6C5 1336 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 ADAMTS7Q9UKP4 1686 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 IGLV5-52A0A0A0MRZ9 124 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 CLEC18AA5D8T8 446 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 LSM1O15116 133 aaKnown RBP4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 MAPK13O15264 365 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 RAD51CO43502 376 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 ECE2O60344 883 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 ATP9AO75110 1047 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 RFPL2O75678 378 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 MOCS3O95396 460 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 DEXIO95424 95 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 MMP1P03956 469 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 TPOP07202 933 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 CDC25CP30307 473 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 SSTR2P30874 369 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 HNRNPH3P31942 346 aaKnown RBP4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 EPS15P42566 896 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 MAGEA1P43355 309 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 STX17P56962 302 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 BNC1Q01954 994 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 EGR4Q05215 589 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 SPOCK1Q08629 439 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 TRAF3Q13114 568 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 GRAPQ13588 217 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 RPS6KA1Q15418 735 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 CLPPQ16740 277 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 TMEM266Q2M3C6 531 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 MYLK3Q32MK0 819 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 CNPY1Q3B7I2 92 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 XKR9Q5GH70 373 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 KCNT1Q5JUK3 1230 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 RGMBQ6NW40 437 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 TMEM53Q6P2H8 277 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 PAPD4Q6PIY7 484 aaKnown RBP4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 BRAT1Q6PJG6 821 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 TPRG1Q6ZUI0 275 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 ASRGL1Q7L266 308 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 NANOGNBQ7Z5D8 188 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 NELFCDQ8IXH7 590 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 IQCF2Q8IXL9 164 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 PEX5LQ8IYB4 626 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 LRRC34Q8IZ02 419 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 FBXL14Q8N1E6 418 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 RIBC1Q8N443 379 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 POMGNT2Q8NAT1 580 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 CLEC18CQ8NCF0 446 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 MCUQ8NE86 351 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 OR2AK2Q8NG84 335 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 GSDMBQ8TAX9 411 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 ACTRT1Q8TDG2 376 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 DQX1Q8TE96 717 aaKnown RBP4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 NAT14Q8WUY8 206 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 PRCCQ92733 491 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 ABTB1Q969K4 478 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 MTBPQ96DY7 904 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 DHTKD1Q96HY7 919 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 CAMK1GQ96NX5 476 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 INPP4AQ96PE3 977 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 OR1F2PQ96R84 312 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 ERGIC2Q96RQ1 377 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 ABHD1Q96SE0 405 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 CGREF1Q99674 301 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 SH3GL1Q99961 368 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 SLX1AQ9BQ83 275 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 SIKE1Q9BRV8 207 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 NTPCRQ9BSD7 190 aaKnown RBP4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 CDK19Q9BWU1 502 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 LRRC2Q9BYS8 371 aa4.3□□□□□ -1.72
HMGB1P16-201ENST00000447155 RTN4RQ9BZR6 473 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms