RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 ZGLP1P0C6A0 271 aa20.06■□□□□ 0.8
VSX1-206ENST00000444511 CLCN7P51798 805 aa20.06■□□□□ 0.8
VSX1-206ENST00000444511 PNLIPRP1P54315 467 aa20.06■□□□□ 0.8
VSX1-206ENST00000444511 ARF3P61204 181 aaPredicted RBP20.06■□□□□ 0.8
VSX1-206ENST00000444511 CCZ1BP86790 482 aa20.06■□□□□ 0.8
VSX1-206ENST00000444511 CCZ1P86791 482 aaPredicted RBP20.06■□□□□ 0.8
VSX1-206ENST00000444511 ELOAQ14241 798 aaKnown RBP20.06■□□□□ 0.8
VSX1-206ENST00000444511 PRTGQ2VWP7 1150 aa20.06■□□□□ 0.8
VSX1-206ENST00000444511 NEK10Q6ZWH5 1172 aa20.06■□□□□ 0.8
VSX1-206ENST00000444511 THOC3Q96J01 351 aaKnown RBP20.06■□□□□ 0.8
VSX1-206ENST00000444511 C10orf90Q96M02 699 aa20.06■□□□□ 0.8
VSX1-206ENST00000444511 EPS8L2Q9H6S3 715 aa20.06■□□□□ 0.8
VSX1-206ENST00000444511 FBXO6Q9NRD1 293 aaPredicted RBP20.06■□□□□ 0.8
VSX1-206ENST00000444511 TAC3Q9UHF0 121 aa20.06■□□□□ 0.8
VSX1-206ENST00000444511 C3orf18Q9UK00 162 aa20.06■□□□□ 0.8
VSX1-206ENST00000444511 MAP2K7O14733 419 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 PRPF4O43172 522 aaKnown RBP eCLIP20.05■□□□□ 0.8
VSX1-206ENST00000444511 DDAH2O95865 285 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 SYF2O95926 243 aaKnown RBP20.05■□□□□ 0.8
VSX1-206ENST00000444511 F7P08709 466 aaPredicted RBP20.05■□□□□ 0.8
VSX1-206ENST00000444511 RNF224P0DH78 156 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 ACPPP15309 386 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 EMP3P54852 163 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 PRDX1Q06830 199 aaKnown RBP20.05■□□□□ 0.8
VSX1-206ENST00000444511 CTBP1Q13363 440 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 CUL1Q13616 776 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 CRB2Q5IJ48 1285 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 ICE2Q659A1 982 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 HIST2H2BCQ6DN03 193 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 PAQR7Q86WK9 346 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 DENND6AQ8IWF6 608 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 RASGEF1CQ8N431 466 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 CSNK1A1LQ8N752 337 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 PPFIBP2Q8ND30 876 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 MCUQ8NE86 351 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 DNAJB14Q8TBM8 379 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 MS4A14Q96JA4 679 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 PBKQ96KB5 322 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 SERPINB12Q96P63 405 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 SLC30A3Q99726 388 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 YIPF2Q9BWQ6 316 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 AGPAT4Q9NRZ5 378 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 ABCF3Q9NUQ8 709 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 KLHL42Q9P2K6 505 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 NOVA2Q9UNW9 492 aaKnown RBP20.05■□□□□ 0.8
VSX1-206ENST00000444511 CSAG2Q9Y5P2 127 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 MAD1L1Q9Y6D9 718 aa20.05■□□□□ 0.8
VSX1-206ENST00000444511 SPTAN1Q13813 2472 aaKnown RBP20.04■□□□□ 0.8
VSX1-206ENST00000444511 IGKV1-8A0A0C4DH67 115 aa20.04■□□□□ 0.8
VSX1-206ENST00000444511 ZCWPW2A0A1B0GU75 182 aa20.04■□□□□ 0.8
VSX1-206ENST00000444511 ANKUB1A6NFN9 424 aa20.04■□□□□ 0.8
VSX1-206ENST00000444511 SLC16A8O95907 504 aa20.04■□□□□ 0.8
VSX1-206ENST00000444511 HPP00738 406 aa20.04■□□□□ 0.8
VSX1-206ENST00000444511 COILP38432 576 aaPredicted RBP20.04■□□□□ 0.8
VSX1-206ENST00000444511 ESPL1Q14674 2120 aa20.04■□□□□ 0.8
VSX1-206ENST00000444511 VWA2Q5GFL6 755 aa20.04■□□□□ 0.8
VSX1-206ENST00000444511 CCDC137Q6PK04 289 aaKnown RBP20.04■□□□□ 0.8
VSX1-206ENST00000444511 IGFL2Q6UWQ7 119 aa20.04■□□□□ 0.8
VSX1-206ENST00000444511 ADCK2Q7Z695 626 aa20.04■□□□□ 0.8
VSX1-206ENST00000444511 GIMAP7Q8NHV1 300 aa20.04■□□□□ 0.8
VSX1-206ENST00000444511 COG1Q8WTW3 980 aa20.04■□□□□ 0.8
VSX1-206ENST00000444511 ZNF480Q8WV37 535 aa20.04■□□□□ 0.8
VSX1-206ENST00000444511 KCNJ9Q92806 393 aa20.04■□□□□ 0.8
VSX1-206ENST00000444511 RERGQ96A58 199 aaPredicted RBP20.04■□□□□ 0.8
VSX1-206ENST00000444511 MVB12AQ96EY5 273 aa20.04■□□□□ 0.8
VSX1-206ENST00000444511 CNDP1Q96KN2 507 aa20.04■□□□□ 0.8
VSX1-206ENST00000444511 NAP1L3Q99457 506 aaPredicted RBP20.04■□□□□ 0.8
VSX1-206ENST00000444511 ZNF160Q9HCG1 818 aa20.04■□□□□ 0.8
VSX1-206ENST00000444511 C20orf96Q9NUD7 363 aaPredicted RBP20.04■□□□□ 0.8
VSX1-206ENST00000444511 TRPC4Q9UBN4 977 aa20.04■□□□□ 0.8
VSX1-206ENST00000444511 RUVBL1Q9Y265 456 aaKnown RBP20.04■□□□□ 0.8
VSX1-206ENST00000444511 NTNG1Q9Y2I2 539 aa20.04■□□□□ 0.8
VSX1-206ENST00000444511 JRKLQ9Y4A0 524 aa20.04■□□□□ 0.8
VSX1-206ENST00000444511 PCM1Q15154 2024 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 ANKRD12Q6UB98 2062 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 IGLV3-12A0A075B6K2 115 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 A1L4Q6 167 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 SMAPO00193 183 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 KIF5CO60282 957 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 MPC1LP0DKB6 136 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 ENO3P13929 434 aaPredicted RBP20.03■□□□□ 0.8
VSX1-206ENST00000444511 EZRP15311 586 aaKnown RBP20.03■□□□□ 0.8
VSX1-206ENST00000444511 SLC1A2P43004 574 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 ABATP80404 500 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 Q0VFX4 171 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 DSG2Q14126 1118 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 LONRF1Q17RB8 773 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 HKDC1Q2TB90 917 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 THEMIS2Q5TEJ8 643 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 ZNF425Q6IV72 752 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 ISLR2Q6UXK2 745 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 LMNTD2Q8IXW0 634 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 FBXO15Q8NCQ5 510 aaPredicted RBP20.03■□□□□ 0.8
VSX1-206ENST00000444511 CALML6Q8TD86 181 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 ASB11Q8WXH4 323 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 C8orf44Q96CB5 159 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 MESP1Q9BRJ9 268 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 PCYOX1Q9UHG3 505 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 NUP210LQ5VU65 1888 aa20.03■□□□□ 0.8
VSX1-206ENST00000444511 NSG1A0A0A6YYJ2 146 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms