RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 ASMTP46597 345 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 ALDH3A2P51648 485 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 ARSFP54793 590 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 ESRRGP62508 458 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 VAC14Q08AM6 782 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 EPS8Q12929 822 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 CAMK1Q14012 370 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 STARD3Q14849 445 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 RBBP5Q15291 538 aaKnown RBP10.1□□□□□ -0.79
CPNE1-218ENST00000439806 HNRNPA1L2Q32P51 320 aaKnown RBP10.1□□□□□ -0.79
CPNE1-218ENST00000439806 CCSMST1Q4G0I0 132 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 TMEM52BQ4KMG9 183 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 MED27Q6P2C8 311 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 ERICH5Q6P6B1 374 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 DOK6Q6PKX4 331 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 TMC5Q6UXY8 1006 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 B3GNT6Q6ZMB0 384 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 SPRED2Q7Z698 418 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 ADGRD2Q7Z7M1 963 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 DSG4Q86SJ6 1040 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 TMPRSS11BQ86T26 416 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 PATL1Q86TB9 770 aaKnown RBP10.1□□□□□ -0.79
CPNE1-218ENST00000439806 TRIM74Q86UV6 250 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 STK32CQ86UX6 486 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 ADHFE1Q8IWW8 467 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 ETFBKMTQ8IXQ9 262 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 SYTL1Q8IYJ3 562 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 CFAP206Q8IYR0 622 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 RNF175Q8N4F7 328 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 LILRA3Q8N6C8 439 aaPredicted RBP10.1□□□□□ -0.79
CPNE1-218ENST00000439806 C12orf76Q8N812 135 aaPredicted RBP10.1□□□□□ -0.79
CPNE1-218ENST00000439806 FBXO15Q8NCQ5 510 aaPredicted RBP10.1□□□□□ -0.79
CPNE1-218ENST00000439806 OR7A2PQ8NGA2 310 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 OR5K1Q8NHB7 308 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 CXorf40AQ8TE69 158 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 FOXJ1Q92949 421 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 AURKBQ96GD4 344 aaPredicted RBP10.1□□□□□ -0.79
CPNE1-218ENST00000439806 REXO5Q96IC2 774 aaKnown RBP10.1□□□□□ -0.79
CPNE1-218ENST00000439806 METTL2AQ96IZ6 378 aaKnown RBP10.1□□□□□ -0.79
CPNE1-218ENST00000439806 ZFYVE19Q96K21 471 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 SAMD11Q96NU1 681 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 PANX1Q96RD7 426 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 MTERF1Q99551 399 aaKnown RBP10.1□□□□□ -0.79
CPNE1-218ENST00000439806 REXO4Q9GZR2 422 aaKnown RBP10.1□□□□□ -0.79
CPNE1-218ENST00000439806 OR2AG1Q9H205 316 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 KAT8Q9H7Z6 458 aaKnown RBP10.1□□□□□ -0.79
CPNE1-218ENST00000439806 SERHLQ9NQF3 203 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 HPS4Q9NQG7 708 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 SPATA6Q9NWH7 488 aaPredicted RBP10.1□□□□□ -0.79
CPNE1-218ENST00000439806 THG1LQ9NWX6 298 aaKnown RBP10.1□□□□□ -0.79
CPNE1-218ENST00000439806 FAM120CQ9NX05 1096 aaKnown RBP10.1□□□□□ -0.79
CPNE1-218ENST00000439806 CIDEBQ9UHD4 219 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 KCNE2Q9Y6J6 123 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 DNAH12Q6ZR08 3092 aa10.1□□□□□ -0.79
CPNE1-218ENST00000439806 HEPACAM2A8MVW5 462 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 G3V2T6 193 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 PLK4O00444 970 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 SCAMP2O15127 329 aaKnown RBP10.09□□□□□ -0.79
CPNE1-218ENST00000439806 VILLO15195 856 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 SPINT1O43278 529 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 MMP20O60882 483 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 PRSS23O95084 383 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 C1orf105O95561 183 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 GNAO1P09471 354 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 ADRB3P13945 408 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 MYOGP15173 224 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 HOXB9P17482 250 aaPredicted RBP10.09□□□□□ -0.79
CPNE1-218ENST00000439806 FSHRP23945 695 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 PDHA2P29803 388 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 ALDH3B2P48448 385 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 GZMMP51124 257 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 METAP1P53582 386 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 CDH15P55291 814 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 TBPL1P62380 186 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 PHEXP78562 749 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 PCDH1Q08174 1060 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 MTAPQ13126 283 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 ELAVL3Q14576 367 aaKnown RBP10.09□□□□□ -0.79
CPNE1-218ENST00000439806 ZNF234Q14588 700 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 PDGFRLQ15198 375 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 HIST2H2ACQ16777 129 aaPredicted RBP10.09□□□□□ -0.79
CPNE1-218ENST00000439806 UGT8Q16880 541 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 ZIK1Q3SY52 487 aaPredicted RBP10.09□□□□□ -0.79
CPNE1-218ENST00000439806 PYCR3Q53H96 274 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 SPIN4Q56A73 249 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 PAGE2BQ5JRK9 111 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 FAM78AQ5JUQ0 283 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 C9orf64Q5T6V5 341 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 NAIF1Q69YI7 327 aaPredicted RBP10.09□□□□□ -0.79
CPNE1-218ENST00000439806 HIST2H2AA3Q6FI13 130 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 TBPL2Q6SJ96 375 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 CRTC3Q6UUV7 619 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 ZNF621Q6ZSS3 439 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 ERN2Q76MJ5 926 aaKnown RBP10.09□□□□□ -0.79
CPNE1-218ENST00000439806 TRMT11Q7Z4G4 463 aaKnown RBP10.09□□□□□ -0.79
CPNE1-218ENST00000439806 NLRP8Q86W28 1048 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 ZDHHC13Q8IUH4 622 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 OFCC1Q8IZS5 231 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 EID3Q8N140 333 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 ZCCHC7Q8N3Z6 543 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms