RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 IRF8Q02556 426 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 LAPTM5Q13571 262 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 DOC2AQ14183 400 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 SMU1Q2TAY7 513 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 RUNDC3AQ59EK9 446 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 XKR6Q5GH73 641 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 OR4F3Q6IEY1 312 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 PSRC1Q6PGN9 363 aaPredicted RBP14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 AGTRAPQ6RW13 159 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 PROSER1Q86XN7 944 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 ZNF557Q8N988 423 aaPredicted RBP14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 LEMD2Q8NC56 503 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 GLB1L3Q8NCI6 653 aaPredicted RBP14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 MAGEE2Q8TD90 523 aaPredicted RBP14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 HERVK_113Q902F9 699 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 DTD2Q96FN9 168 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 OSBPL6Q9BZF3 934 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 SELENONQ9NZV5 590 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 NFKBIL1Q9UBC1 381 aaPredicted RBP14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 KIF26AQ9ULI4 1882 aaPredicted RBP14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 WNT9AO14904 365 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 SLC16A5O15375 505 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 HOXC11O43248 304 aaPredicted RBP14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 SNAP29O95721 258 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 SRPRAP08240 638 aaKnown RBP14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 JUPP14923 745 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 ZNF23P17027 643 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 PPP1R8Q12972 351 aaKnown RBP14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 ZNF658BQ4V348 819 aaPredicted RBP14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 FNDC3BQ53EP0 1204 aaKnown RBP14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 C9orf64Q5T6V5 341 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 ANKRD34AQ69YU3 496 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 KRT80Q6KB66 452 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 NPAS3Q8IXF0 933 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 TBC1D21Q8IYX1 336 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 OR7A2PQ8NGA2 310 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 CDC26Q8NHZ8 85 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 CYGBQ8WWM9 190 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 TMEM159Q96B96 161 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 COQ10AQ96MF6 247 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 VPS35Q96QK1 796 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 PKP4Q99569 1192 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 NRTNQ99748 197 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 CPPED1Q9BRF8 314 aaPredicted RBP14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 HAUS8Q9BT25 410 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 C9orf16Q9BUW7 83 aa14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 SCHIP1Q9P0W5 487 aaPredicted RBP14.71□□□□□ -0.05
SCAMP4-202ENST00000409472 CEP290O15078 2479 aa14.71□□□□□ -0.06
SCAMP4-202ENST00000409472 C5orf67F2Z3F1 127 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 SLC9A3R1O14745 358 aaPredicted RBP14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 ATG13O75143 517 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 SEC24DO94855 1032 aaPredicted RBP14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 LDLRP01130 860 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 ZNF12P17014 697 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 MERTKQ12866 999 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 C16orf72Q14CZ0 275 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 OTUD3Q5T2D3 398 aaPredicted RBP14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 NOXRED1Q6NXP6 359 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 ERAP2Q6P179 960 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 PRR23BQ6ZRT6 265 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 NEK10Q6ZWH5 1172 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 HS3ST5Q8IZT8 346 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 WDR20Q8TBZ3 569 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 GLMNQ92990 594 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 CMTM7Q96FZ5 175 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 CCDC115Q96NT0 180 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 OR2AG1Q9H205 316 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 KAT8Q9H7Z6 458 aaKnown RBP14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 SLC8A2Q9UPR5 921 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 INVSQ9Y283 1065 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 GPC6Q9Y625 555 aaPredicted RBP14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 CEPT1Q9Y6K0 416 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 DOCK9Q9BZ29 2069 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 FUOMA2VDF0 154 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 HEPACAM2A8MVW5 462 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 H3BNH8 94 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 YY2O15391 372 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 MMP20O60882 483 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 RECQL5O94762 991 aaPredicted RBP14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 ADH1CP00326 375 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 MYCLP1P12525 358 aaPredicted RBP14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 CDK9P50750 372 aaKnown RBP14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 ST8SIA6P61647 398 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 LDLRAP1Q5SW96 308 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 TMTC4Q5T4D3 741 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 UBE2Q1Q7Z7E8 422 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 GALNT10Q86SR1 603 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 TMIGD2Q96BF3 282 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 CCM2Q9BSQ5 444 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 LTB4R2Q9NPC1 389 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 LIMD1Q9UGP4 676 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 PRKAB1Q9Y478 270 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 PCM1Q15154 2024 aa14.7□□□□□ -0.06
SCAMP4-202ENST00000409472 H0Y858 1186 aa14.69□□□□□ -0.06
SCAMP4-202ENST00000409472 ZNF197O14709 1029 aa14.69□□□□□ -0.06
SCAMP4-202ENST00000409472 KPNA5O15131 536 aa14.69□□□□□ -0.06
SCAMP4-202ENST00000409472 LILRB5O75023 590 aa14.69□□□□□ -0.06
SCAMP4-202ENST00000409472 H6PDO95479 791 aa14.69□□□□□ -0.06
SCAMP4-202ENST00000409472 UMPSP11172 480 aa14.69□□□□□ -0.06
SCAMP4-202ENST00000409472 FCGR1AP12314 374 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms