RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 LRRC42Q9Y546 428 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 GMPPBQ9Y5P6 360 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 DICER1Q9UPY3 1922 aaKnown RBP13.61□□□□□ -0.23
SCAF4-202ENST00000399804 A0A1W2PRB8 838 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 EIF3FO00303 357 aaPredicted RBP13.61□□□□□ -0.23
SCAF4-202ENST00000399804 FAM20BO75063 409 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 PRKD3O94806 890 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 ITGB7P26010 798 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 PTX3P26022 381 aaPredicted RBP13.61□□□□□ -0.23
SCAF4-202ENST00000399804 NTSR1P30989 418 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 CLCN7P51798 805 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 TBPL1P62380 186 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 RPS21P63220 83 aaKnown RBP13.61□□□□□ -0.23
SCAF4-202ENST00000399804 GCNT6Q5T4J0 391 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 DPPA4Q7L190 304 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 C16orf62Q7Z3J2 963 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 PATL1Q86TB9 770 aaKnown RBP13.61□□□□□ -0.23
SCAF4-202ENST00000399804 PLD3Q8IV08 490 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 TET1Q8NFU7 2136 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 SMPD3Q9NY59 655 aaPredicted RBP13.61□□□□□ -0.23
SCAF4-202ENST00000399804 EI24O14681 340 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 RAP2AP10114 183 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 ETS2P15036 469 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 HOXA9P31269 272 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 RANBP1P43487 201 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 SOX9P48436 509 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 SKP1P63208 163 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 SPIBQ01892 262 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 SHHQ15465 462 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 GALNT5Q7Z7M9 940 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 DNAJB8Q8NHS0 232 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 ZCCHC10Q8TBK6 192 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 POP5Q969H6 163 aaKnown RBP13.61□□□□□ -0.23
SCAF4-202ENST00000399804 LMLNQ96KR4 655 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 FZD3Q9NPG1 666 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 LATO43561 262 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 JUPP14923 745 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 HPGDP15428 266 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 ITGA2P17301 1181 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 LHCGRP22888 699 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 PSMB9P28065 219 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 GJA4P35212 333 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 YAP1P46937 504 aaKnown RBP13.61□□□□□ -0.23
SCAF4-202ENST00000399804 TAS2R50P59544 299 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 MS4A2Q01362 244 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 SIM2Q14190 667 aaPredicted RBP13.61□□□□□ -0.23
SCAF4-202ENST00000399804 C5orf22Q49AR2 442 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 USP39Q53GS9 565 aaKnown RBP13.61□□□□□ -0.23
SCAF4-202ENST00000399804 SFT2D3Q587I9 215 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 PIGGQ5H8A4 983 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 Q6ZNB5 142 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 PARGQ86W56 976 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 ZFAND4Q86XD8 727 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 OR4E2Q8NGC2 313 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 PDLIM5Q96HC4 596 aaKnown RBP13.61□□□□□ -0.23
SCAF4-202ENST00000399804 CDCA3Q99618 268 aaPredicted RBP13.61□□□□□ -0.23
SCAF4-202ENST00000399804 DCUN1D5Q9BTE7 237 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 CRISPLD2Q9H0B8 497 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 RC3H2Q9HBD1 1191 aaKnown RBP13.61□□□□□ -0.23
SCAF4-202ENST00000399804 PTPRFP10586 1907 aa13.61□□□□□ -0.23
SCAF4-202ENST00000399804 H3BQ06 376 aaPredicted RBP13.6□□□□□ -0.23
SCAF4-202ENST00000399804 SERPINB7O75635 380 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 NUP107P57740 925 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 CCDC157Q569K6 752 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 ZDHHC21Q8IVQ6 265 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 OR4K1Q8NGD4 311 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 FAM192AQ9GZU8 254 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 CLK4Q9HAZ1 481 aaKnown RBP13.6□□□□□ -0.23
SCAF4-202ENST00000399804 DDX18Q9NVP1 670 aaKnown RBP13.6□□□□□ -0.23
SCAF4-202ENST00000399804 WDR90Q96KV7 1748 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 PRSS51A0A1B0GVH4 220 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 UBFD1O14562 309 aaKnown RBP13.6□□□□□ -0.23
SCAF4-202ENST00000399804 AOAHP28039 575 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 ARRB2P32121 409 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 SLC16A1P53985 500 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 NR1H2P55055 460 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 ZNF423Q2M1K9 1284 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 OR5AK3PQ8NH89 298 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 BIRC7Q96CA5 298 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 DTD2Q96FN9 168 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 DGCR6LQ9BY27 220 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 TPRKBQ9Y3C4 175 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 DYRK3O43781 588 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 SLC35G6P0C7Q6 338 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 C1GALT1C1LP0DN25 315 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 BUD31P41223 144 aaPredicted RBP13.6□□□□□ -0.23
SCAF4-202ENST00000399804 SUOXP51687 545 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 TNFAIP8L2Q6P589 184 aaPredicted RBP13.6□□□□□ -0.23
SCAF4-202ENST00000399804 LILRA6Q6PI73 481 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 STX19Q8N4C7 294 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 OR52J3Q8NH60 311 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 SLC45A3Q96JT2 553 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 RAB11FIP5Q9BXF6 653 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 POLR1BQ9H9Y6 1135 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 KRT84Q9NSB2 600 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 ZNF282Q9UDV7 671 aaPredicted RBP13.6□□□□□ -0.23
SCAF4-202ENST00000399804 KLHL3Q9UH77 587 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 ACSL5Q9ULC5 683 aa13.6□□□□□ -0.23
SCAF4-202ENST00000399804 NUAK1O60285 661 aa13.59□□□□□ -0.23
SCAF4-202ENST00000399804 OR10H2O60403 315 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms