RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 TRNAU1APQ9NX07 287 aaKnown RBP11.68□□□□□ -0.54
USF1-203ENST00000368021 POLG2Q9UHN1 485 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 TAGLN3Q9UI15 199 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 PSMD13Q9UNM6 376 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 KCNK6Q9Y257 313 aa11.68□□□□□ -0.54
USF1-203ENST00000368021 ATP6AP2A0A1C7CYW4 349 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 ZNF839A8K0R7 811 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 E7ENX8 843 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 ATP6AP2O75787 350 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 LINC00032P0C843 101 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 ESRRAP11474 423 aaPredicted RBP11.67□□□□□ -0.54
USF1-203ENST00000368021 PRDX6P30041 224 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 ATP4BP51164 291 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 PNLIPRP1P54315 467 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 SRP54P61011 504 aaKnown RBP11.67□□□□□ -0.54
USF1-203ENST00000368021 TAP2Q03519 686 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 E2F2Q14209 437 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 GRB7Q14451 532 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 TMEM198Q66K66 360 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 LAIR1Q6GTX8 287 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 SLC36A4Q6YBV0 504 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 LRRC56Q8IYG6 542 aaPredicted RBP11.67□□□□□ -0.54
USF1-203ENST00000368021 SYTL1Q8IYJ3 562 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 OR13H1Q8NG92 308 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 SNX19Q92543 992 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 PIGKQ92643 395 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 USP7Q93009 1102 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 TUBGCP3Q96CW5 907 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 CMTM5Q96DZ9 223 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 MED8Q96G25 268 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 TMEM74BQ9NUR3 256 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 RIC8BQ9NVN3 520 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 PCOLCE2Q9UKZ9 415 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 BTRCQ9Y297 605 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 RNF11Q9Y3C5 154 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 PTGDR2Q9Y5Y4 395 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 KCNE2Q9Y6J6 123 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 LRP4O75096 1905 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 KCNE1BA0A087WTH5 132 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 SPTY2D1-AS1A0A0U1RR47 76 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 METTL12A8MUP2 240 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 ULK1O75385 1050 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 KRT6AP02538 564 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 KRT6BP04259 564 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 LBPP18428 481 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 S100A1P23297 94 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 CASP2P42575 452 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 KRT6CP48668 564 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 TBPL1P62380 186 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 ZNF33BQ06732 778 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 KLF10Q13118 480 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 CYLC2Q14093 348 aaPredicted RBP11.67□□□□□ -0.54
USF1-203ENST00000368021 ALG11Q2TAA5 492 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 IL27RAQ6UWB1 636 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 ABRAXAS1Q6UWZ7 409 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 TRIM46Q7Z4K8 759 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 C11orf74Q86VG3 221 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 DCP2Q8IU60 420 aaKnown RBP11.67□□□□□ -0.54
USF1-203ENST00000368021 IQCF2Q8IXL9 164 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 ST13P4Q8IZP2 240 aaPredicted RBP11.67□□□□□ -0.54
USF1-203ENST00000368021 SLC22A18ASQ8N1D0 253 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 SETD7Q8WTS6 366 aaKnown RBP11.67□□□□□ -0.54
USF1-203ENST00000368021 SLC7A6OSQ96CW6 309 aaPredicted RBP11.67□□□□□ -0.54
USF1-203ENST00000368021 C12orf66Q96MD2 445 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 OR4K3Q96R72 315 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 INSM2Q96T92 566 aaPredicted RBP11.67□□□□□ -0.54
USF1-203ENST00000368021 CGREF1Q99674 301 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 MIPEPQ99797 713 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 ARPC5LQ9BPX5 153 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 MENTQ9BUN1 341 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 MIR1-1HGQ9H1L0 117 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 LRMDAQ9H2I8 198 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 MVB12BQ9H7P6 319 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 CROTQ9UKG9 612 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 SNX6Q9UNH7 406 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 PLEKHM1Q9Y4G2 1056 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 HEBP2Q9Y5Z4 205 aa11.67□□□□□ -0.54
USF1-203ENST00000368021 COPG1Q9Y678 874 aaKnown RBP11.67□□□□□ -0.54
USF1-203ENST00000368021 KNL1Q8NG31 2342 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 RETP07949 1114 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 JUPP14923 745 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 CD27P26842 260 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 PTPN4P29074 926 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 HNF4AP41235 474 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 MRPL19P49406 292 aaKnown RBP11.66□□□□□ -0.54
USF1-203ENST00000368021 IRF8Q02556 426 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 CHIT1Q13231 466 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 SQLEQ14534 574 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 CLCA4Q14CN2 919 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 ABRAXAS2Q15018 415 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 CYP2A13Q16696 494 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 SMU1Q2TAY7 513 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 TCHHL1Q5QJ38 904 aaPredicted RBP11.66□□□□□ -0.54
USF1-203ENST00000368021 LYSMD4Q5XG99 296 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 FAM219BQ5XKK7 198 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 TCEAL6Q6IPX3 200 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 DNAJC14Q6Y2X3 702 aaPredicted RBP11.66□□□□□ -0.54
USF1-203ENST00000368021 Q6ZSR9 355 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 KIAA2013Q8IYS2 634 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 RAB42Q8N4Z0 105 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms