RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 SLC35F1Q5T1Q4 408 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 PDZD7Q9H5P4 517 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 SAR1AQ9NR31 198 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 ACTR10Q9NZ32 417 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 GABRB2P47870 512 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 IL23RQ5VWK5 629 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 VHLLQ6RSH7 139 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 PIP5K1AQ99755 562 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 IPPKQ9H8X2 491 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 SERINC1Q9NRX5 453 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 ZNF860A6NHJ4 632 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 BCAS1O75363 584 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 IGFBP1P08833 259 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 RPL3P39023 403 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 BDKRB1P46663 353 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 CASP6P55212 293 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 MTPNP58546 118 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 PPP1R8Q12972 351 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 ZNF648Q5T619 568 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 OR10T2Q8NGX3 314 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 DNAJC19Q96DA6 116 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 ANKRD27Q96NW4 1050 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 SLC17A6Q9P2U8 582 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 DNAJB11Q9UBS4 358 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 MFHAS1Q9Y4C4 1052 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 SLC38A8A6NNN8 435 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 QPCTQ16769 361 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 PDE12Q6L8Q7 609 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 PHF13Q86YI8 300 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 FAM47BQ8NA70 645 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 CYP8B1Q9UNU6 501 aa16.62■□□□□ 0.25
CACNA1A-253ENST00000637927 DIP2CQ9Y2E4 1556 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 FADS2P1A8MWK0 482 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 RPS9P46781 194 aaKnown RBP16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 LTC4SQ16873 150 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 AGAP2Q99490 1192 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 SLC6A7Q99884 636 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 MMADHCQ9H3L0 296 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 ABCD2Q9UBJ2 740 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 REXO2Q9Y3B8 237 aaKnown RBP16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 AFDNP55196 1824 aaKnown RBP16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 KANTRA0A1W2PQU2 76 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 TCRBV7S2A1N4TA0A589 114 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 OR6C75A6NL08 312 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 CHST10O43529 356 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 KLK1P06870 262 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 TSHRP16473 764 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 NPR2P20594 1047 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 CSKP41240 450 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 GALK2Q01415 458 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 GBE1Q04446 702 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 OR2T12Q8NG77 320 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 NSMAFQ92636 917 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 HSPBAP1Q96EW2 488 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 C1orf21Q9H246 121 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 RHCGQ9UBD6 479 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 IL36AQ9UHA7 158 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 NOP16Q9Y3C1 178 aaKnown RBP16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 SLC30A4O14863 429 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 TBX18O95935 607 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 ZNF35P13682 527 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 STK11Q15831 433 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 SCAMP5Q8TAC9 235 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 PDCD1LG2Q9BQ51 273 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 ARL8BQ9NVJ2 186 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 LYARQ9NX58 379 aaKnown RBP16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 SMIM35A0A1B0GVV1 85 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 SH3PXD2BA1X283 911 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 M0R129 80 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 ZNF12P17014 697 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 CHIT1Q13231 466 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 GPM6BQ13491 265 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 SLX4IPQ5VYV7 408 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 GPR153Q6NV75 609 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 SLC24A5Q71RS6 500 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 ZNF709Q8N972 641 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 CLDN9O95484 217 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 MMP14P50281 582 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 CACNG1Q06432 222 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 NOMO1Q15155 1222 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 HAGHLQ6PII5 290 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 KREMEN1Q96MU8 473 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 NELFAQ9H3P2 528 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 C14orf166Q9Y224 244 aaKnown RBP16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 AP4B1Q9Y6B7 739 aa16.61■□□□□ 0.25
CACNA1A-253ENST00000637927 PREX1Q8TCU6 1659 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 DPPA5A6NC42 116 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 TRIM64CA6NLI5 447 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 SOX1O00570 391 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 ARPC2O15144 300 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 VIPR1P32241 457 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 FAM76BQ5HYJ3 339 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 SLC2A7Q6PXP3 512 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 SGCZQ96LD1 299 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 FUCA2Q9BTY2 467 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 RSL24D1Q9UHA3 163 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 HEBP2Q9Y5Z4 205 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 REREQ9P2R6 1566 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 SCO2O43819 266 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 RPS17P08708 135 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms