RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 CTAGE15A4D2H0 777 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 B4DGG1 531 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 GOLGA8KD6RF30 607 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 E7ESA3 106 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 GOLGA8TH3BQL2 631 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 KIR2DS3K7RE56 304 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 M0R3H8 397 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 QSOX1O00391 747 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 PPM1DO15297 605 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 SULT1B1O43704 296 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 OR1I1O60431 355 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 BANF1O75531 89 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 OR5F1O95221 314 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 TTC4O95801 387 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 GSTM1P09488 218 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 OR56A5P0C7T3 313 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 CTAGE8P0CG41 777 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 SLC2A4P14672 509 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 BRAFP15056 766 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 TMEM11P17152 192 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 PGAM1P18669 254 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 XRCC1P18887 633 aaPredicted RBP6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 S100A1P23297 94 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 ADH7P40394 386 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 FASLGP48023 281 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 TTPAP49638 278 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 PRLHRP49683 370 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 ARL4CP56559 192 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 GSTM4Q03013 218 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 CAV1Q03135 178 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 ACY1Q03154 408 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 CALCOCO2Q13137 446 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 KIR2DS5Q14953 304 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 CLCA4Q14CN2 919 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 NAA25Q14CX7 972 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 TRADDQ15628 312 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 SMAD1Q15797 465 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 SNCBQ16143 134 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 ZNF658BQ4V348 819 aaPredicted RBP6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 GLE1Q53GS7 698 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 AARS2Q5JTZ9 985 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 INTS11Q5TA45 600 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 GKAP1Q5VSY0 366 aaPredicted RBP6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 CDCP2Q5VXM1 449 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 MRNIPQ6NTE8 343 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 NEPROQ6NW34 567 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 CNSTQ6PJW8 725 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 DHRS13Q6UX07 377 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 FAM83HQ6ZRV2 1179 aaPredicted RBP6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 TMPRSS7Q7RTY8 843 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 EFL1Q7Z2Z2 1120 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 RAB44Q7Z6P3 723 aaPredicted RBP6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 LDB1Q86U70 411 aaPredicted RBP6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 SLC9B2Q86UD5 537 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 CTAGE6Q86UF2 777 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 IGDCC3Q8IVU1 814 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 CTAGE4Q8IX94 777 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 CFAP206Q8IYR0 622 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 CEP112Q8N8E3 955 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 KYQ8NBH2 561 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 MAPK15Q8TD08 544 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 PATE1Q8WXA2 126 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 SEC14L1Q92503 715 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 NAT6Q93015 286 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 ART4Q93070 314 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 STAMBPL1Q96FJ0 436 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 CCDC3Q9BQI4 270 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 ZPBPQ9BS86 351 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 CCDC106Q9BWC9 280 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 DRC3Q9H069 523 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 STMN4Q9H169 189 aaPredicted RBP6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 P2RY12Q9H244 342 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 VPS11Q9H270 941 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 DPH5Q9H2P9 285 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 BRD7Q9NPI1 651 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 ACSL5Q9ULC5 683 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 TMEM5Q9Y2B1 443 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 RNF215Q9Y6U7 377 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 MED19A0JLT2 244 aaPredicted RBP6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 F8W8V4 182 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 NTN3O00634 580 aaPredicted RBP6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 PRMT5O14744 637 aaPredicted RBP6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 HAT1O14929 419 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 PFDN6O15212 129 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 B4GAT1O43505 415 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 NDUFS3O75489 264 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 TOP3BO95985 862 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 HRGP04196 525 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 CCDC166P0CW27 439 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 STMN1P16949 149 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 OGNP20774 298 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 RPL10P27635 214 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 ELK3P41970 407 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 GPR3P46089 330 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 LSSP48449 732 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 SMCPP49901 116 aaPredicted RBP6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 ADARP55265 1226 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 MAZP56270 477 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 RELBQ01201 579 aa6.1□□□□□ -1.43
ATPAF1-209ENST00000529214 HHEXQ03014 270 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms