RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ZNF7P17097 686 aaPredicted RBP12.02□□□□□ -0.48
USP11-206ENST00000469080 GSTM2P28161 218 aa12.02□□□□□ -0.48
USP11-206ENST00000469080 CST5P28325 142 aaPredicted RBP12.02□□□□□ -0.48
USP11-206ENST00000469080 MAPK12P53778 367 aa12.02□□□□□ -0.48
USP11-206ENST00000469080 MTPNP58546 118 aa12.02□□□□□ -0.48
USP11-206ENST00000469080 FPGSQ05932 587 aa12.02□□□□□ -0.48
USP11-206ENST00000469080 TOP3AQ13472 1001 aaPredicted RBP12.02□□□□□ -0.48
USP11-206ENST00000469080 REP15Q6BDI9 236 aa12.02□□□□□ -0.48
USP11-206ENST00000469080 Q6ZVL8 140 aa12.02□□□□□ -0.48
USP11-206ENST00000469080 SLC22A9Q8IVM8 553 aa12.02□□□□□ -0.48
USP11-206ENST00000469080 SLC44A2Q8IWA5 706 aaPredicted RBP12.02□□□□□ -0.48
USP11-206ENST00000469080 C7orf61Q8IZ16 206 aa12.02□□□□□ -0.48
USP11-206ENST00000469080 TMEM102Q8N9M5 508 aaPredicted RBP12.02□□□□□ -0.48
USP11-206ENST00000469080 HJURPQ8NCD3 748 aaPredicted RBP12.02□□□□□ -0.48
USP11-206ENST00000469080 REXO4Q9GZR2 422 aaKnown RBP12.02□□□□□ -0.48
USP11-206ENST00000469080 DPP7Q9UHL4 492 aa12.02□□□□□ -0.48
USP11-206ENST00000469080 MRPS23Q9Y3D9 190 aaKnown RBP12.02□□□□□ -0.48
USP11-206ENST00000469080 NRP2O60462 931 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 PRKD3O94806 890 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 IGSF6O95976 241 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 GLUD1P00367 558 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 IL1BP01584 269 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 BMP4P12644 408 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 CD1DP15813 335 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 SERPINA4P29622 427 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 LEPRP48357 1165 aaKnown RBP12.02□□□□□ -0.49
USP11-206ENST00000469080 RGS4P49798 205 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 ERVFC1P60507 584 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 FAM189BP81408 668 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 TUBB3Q13509 450 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 LRRC26Q2I0M4 334 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 ZNF678Q5SXM1 525 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 NDUFAF5Q5TEU4 345 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 ZNF438Q7Z4V0 828 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 GALNT11Q8NCW6 608 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 VANGL1Q8TAA9 524 aaPredicted RBP12.02□□□□□ -0.49
USP11-206ENST00000469080 TOE1Q96GM8 510 aaKnown RBP12.02□□□□□ -0.49
USP11-206ENST00000469080 MSANTD3Q96H12 275 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 EBPLQ9BY08 206 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 GHITMQ9H3K2 345 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 CYB5R1Q9UHQ9 305 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 PRSS21Q9Y6M0 314 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 PIKFYVEQ9Y2I7 2098 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 A0A0G2JMZ2 1700 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 GLYATL1P3A0A0U1RQE8 302 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 CPSF4O95639 269 aaKnown RBP12.02□□□□□ -0.49
USP11-206ENST00000469080 HIST1H2AGP0C0S8 130 aaPredicted RBP12.02□□□□□ -0.49
USP11-206ENST00000469080 HIST1H2ADP20671 130 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 AP2S1P53680 142 aaPredicted RBP12.02□□□□□ -0.49
USP11-206ENST00000469080 TOR2AQ5JU69 321 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 LRRC66Q68CR7 880 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 ARSKQ6UWY0 536 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 BNIPLQ7Z465 357 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 CELF2-AS1Q8N7Q2 184 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 AURKBQ96GD4 344 aaPredicted RBP12.02□□□□□ -0.49
USP11-206ENST00000469080 FBXL20Q96IG2 436 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 HIST1H2AHQ96KK5 128 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 RNF145Q96MT1 663 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 HIST1H2AJQ99878 128 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 H2AFJQ9BTM1 129 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 EMC3Q9P0I2 261 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 SNX7Q9UNH6 387 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 SORCS3Q9UPU3 1222 aa12.02□□□□□ -0.49
USP11-206ENST00000469080 A0A0G2JMP0 313 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 KDELR3O43731 214 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 TTPAP49638 278 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 TMBIM6P55061 237 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 CYP51A1Q16850 503 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 SYTL3Q4VX76 610 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 ATP6AP1LQ52LC2 224 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 TBCELQ5QJ74 424 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 SERPINA13PQ6UXR4 307 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 EID3Q8N140 333 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 OR8K3Q8NH51 312 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 LKAAEAR1Q8TD35 194 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 BADQ92934 168 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 BTBD2Q9BX70 525 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 SLC46A2Q9BY10 475 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 SLA2Q9H6Q3 261 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 IL37Q9NZH6 218 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 VTI1BQ9UEU0 232 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 SPTBP11277 2137 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 LEFTY2O00292 366 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 SAP18O00422 153 aaKnown RBP12.01□□□□□ -0.49
USP11-206ENST00000469080 NRG2O14511 850 aaPredicted RBP12.01□□□□□ -0.49
USP11-206ENST00000469080 ARHGEF9O43307 516 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 EPCAMP16422 314 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 LBPP18428 481 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 IL12AP29459 219 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 DPP6P42658 865 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 PRKG2Q13237 762 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 NFE2L1Q14494 772 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 PTGR1Q14914 329 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 ARSIQ5FYB1 569 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 FAM209BQ5JX69 171 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 TMEM236Q5W0B7 351 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 GPRIN3Q6ZVF9 776 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 TRAPPC5Q8IUR0 188 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 OR10Z1Q8NGY1 313 aa12.01□□□□□ -0.49
USP11-206ENST00000469080 CCDC126Q96EE4 140 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 292.7 ms