RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 PSMG2Q969U7 264 aa4.19□□□□□ -1.74
GTF3C3-207ENST00000451088 SH3KBP1Q96B97 665 aa4.19□□□□□ -1.74
GTF3C3-207ENST00000451088 SENP8Q96LD8 212 aa4.19□□□□□ -1.74
GTF3C3-207ENST00000451088 CEP295NLQ96MC4 621 aa4.19□□□□□ -1.74
GTF3C3-207ENST00000451088 ACCSQ96QU6 501 aa4.19□□□□□ -1.74
GTF3C3-207ENST00000451088 PAIP2Q9BPZ3 127 aaKnown RBP4.19□□□□□ -1.74
GTF3C3-207ENST00000451088 CCSER1Q9C0I3 900 aa4.19□□□□□ -1.74
GTF3C3-207ENST00000451088 ZSCAN16Q9H4T2 348 aaPredicted RBP4.19□□□□□ -1.74
GTF3C3-207ENST00000451088 TMEM206Q9H813 350 aa4.19□□□□□ -1.74
GTF3C3-207ENST00000451088 KIF9Q9HAQ2 790 aa4.19□□□□□ -1.74
GTF3C3-207ENST00000451088 POLD4Q9HCU8 107 aa4.19□□□□□ -1.74
GTF3C3-207ENST00000451088 EHD2Q9NZN4 543 aa4.19□□□□□ -1.74
GTF3C3-207ENST00000451088 ANKMY1Q9P2S6 941 aa4.19□□□□□ -1.74
GTF3C3-207ENST00000451088 UXTQ9UBK9 157 aaPredicted RBP4.19□□□□□ -1.74
GTF3C3-207ENST00000451088 TUBGCP4Q9UGJ1 667 aa4.19□□□□□ -1.74
GTF3C3-207ENST00000451088 CPSF3Q9UKF6 684 aaKnown RBP4.19□□□□□ -1.74
GTF3C3-207ENST00000451088 ZNF638Q14966 1978 aaKnown RBP4.19□□□□□ -1.74
GTF3C3-207ENST00000451088 F8P00451 2351 aa4.19□□□□□ -1.74
GTF3C3-207ENST00000451088 TLN1Q9Y490 2541 aaKnown RBP4.19□□□□□ -1.74
GTF3C3-207ENST00000451088 SDK2Q58EX2 2172 aa4.19□□□□□ -1.74
GTF3C3-207ENST00000451088 COL4A2P08572 1712 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 MED13LQ71F56 2210 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 MTMR11A4FU01 709 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 VPS37CA5D8V6 355 aaPredicted RBP4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 HEPACAM2A8MVW5 462 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 NPIPB11E5RHQ5 1161 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 PIRO00625 290 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 SLC25A17O43808 307 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 HUS1O60921 280 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 SEC24AO95486 1093 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 PLGP00747 810 aaPredicted RBP4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 CSH1P0DML2 217 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 CSH2P0DML3 217 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 TRIM21P19474 475 aaKnown RBP4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 FCARP24071 287 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 LHX1P48742 406 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 CXCR3P49682 368 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 GTF2A1P52655 376 aaPredicted RBP4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 RPL10AP62906 217 aaKnown RBP4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 MYL7Q01449 175 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 FCHO2Q0JRZ9 810 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 BFSP1Q12934 665 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 DLG1Q12959 904 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 SNTA1Q13424 505 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 DHX8Q14562 1220 aaKnown RBP4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 PON2Q15165 354 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 TEAD2Q15562 447 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 MAPRE1Q15691 268 aaKnown RBP4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 ZBTB6Q15916 424 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 PDCD2Q16342 344 aaPredicted RBP4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 SLC39A12Q504Y0 691 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 JADE1Q6IE81 842 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 CENPPQ6IPU0 288 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 RETSATQ6NUM9 610 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 KLHL24Q6TFL4 600 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 VITQ6UXI7 678 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 ZNF771Q7L3S4 317 aaPredicted RBP4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 PRSS45Q7RTY3 260 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 ZNF720Q7Z2F6 126 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 DNAJB7Q7Z6W7 309 aaPredicted RBP4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 ARID3BQ8IVW6 561 aaPredicted RBP4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 SFTPA2Q8IWL1 248 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 CCDC65Q8IXS2 484 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 SYCP3Q8IZU3 236 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 HDDC3Q8N4P3 179 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 LRRC52Q8N7C0 313 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 DNAAF1Q8NEP3 725 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 MRPS31Q92665 395 aaKnown RBP4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 TCEAL4Q96EI5 215 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 WBP1Q96G27 269 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 SCMH1Q96GD3 660 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 LRFN5Q96NI6 719 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 PGLYRP2Q96PD5 576 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 PLIN2Q99541 437 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 SEPT5Q99719 369 aaPredicted RBP4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 PYM1Q9BRP8 204 aaKnown RBP4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 FAM167BQ9BTA0 163 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 NUSAP1Q9BXS6 441 aaKnown RBP4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 CXCL16Q9H2A7 254 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 CUEDC2Q9H467 287 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 MAGEF1Q9HAY2 307 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 OLFML3Q9NRN5 406 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 DPP3Q9NY33 737 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 IFT80Q9P2H3 777 aaPredicted RBP4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 ITGA11Q9UKX5 1188 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 NFS1Q9Y697 457 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 STYXL1Q9Y6J8 313 aa4.18□□□□□ -1.74
GTF3C3-207ENST00000451088 NBPF19A0A087WUL8 3843 aa4.17□□□□□ -1.74
GTF3C3-207ENST00000451088 FBN2P35556 2912 aa4.17□□□□□ -1.74
GTF3C3-207ENST00000451088 TNRC6BQ9UPQ9 1833 aaKnown RBP4.17□□□□□ -1.74
GTF3C3-207ENST00000451088 MYBPHLA2RUH7 354 aa4.17□□□□□ -1.74
GTF3C3-207ENST00000451088 CPED1A4D0V7 1026 aa4.17□□□□□ -1.74
GTF3C3-207ENST00000451088 MAGEA13PA6NCF6 341 aa4.17□□□□□ -1.74
GTF3C3-207ENST00000451088 CBY3A6NI87 242 aa4.17□□□□□ -1.74
GTF3C3-207ENST00000451088 FAM90A7PA6NKC0 464 aa4.17□□□□□ -1.74
GTF3C3-207ENST00000451088 FAM90A22PA8MWA6 464 aa4.17□□□□□ -1.74
GTF3C3-207ENST00000451088 FAM90A12PA8MX19 464 aa4.17□□□□□ -1.74
GTF3C3-207ENST00000451088 FAM90A23PA8MXZ1 464 aa4.17□□□□□ -1.74
GTF3C3-207ENST00000451088 KPNA7A9QM74 516 aa4.17□□□□□ -1.74
GTF3C3-207ENST00000451088 SPECC1L-ADORA2AF8WAN1 911 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms