RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 ARMC5Q96C12 935 aa16.8■□□□□ 0.28
CDCP1-201ENST00000296129 IFT27Q9BW83 186 aa16.8■□□□□ 0.28
CDCP1-201ENST00000296129 CD244Q9BZW8 370 aa16.8■□□□□ 0.28
CDCP1-201ENST00000296129 ELOVL2Q9NXB9 296 aa16.8■□□□□ 0.28
CDCP1-201ENST00000296129 GPC6Q9Y625 555 aaPredicted RBP16.8■□□□□ 0.28
CDCP1-201ENST00000296129 CYP11A1P05108 521 aa16.8■□□□□ 0.28
CDCP1-201ENST00000296129 AOC1P19801 751 aa16.8■□□□□ 0.28
CDCP1-201ENST00000296129 MADCAM1Q13477 382 aa16.8■□□□□ 0.28
CDCP1-201ENST00000296129 TGFBIQ15582 683 aa16.8■□□□□ 0.28
CDCP1-201ENST00000296129 TOR1AIP1Q5JTV8 583 aa16.8■□□□□ 0.28
CDCP1-201ENST00000296129 SLC25A24Q6NUK1 477 aa16.8■□□□□ 0.28
CDCP1-201ENST00000296129 OR10G2Q8NGC3 310 aa16.8■□□□□ 0.28
CDCP1-201ENST00000296129 OR4C6Q8NH72 309 aa16.8■□□□□ 0.28
CDCP1-201ENST00000296129 ADAM7Q9H2U9 754 aa16.8■□□□□ 0.28
CDCP1-201ENST00000296129 KCNK6Q9Y257 313 aa16.8■□□□□ 0.28
CDCP1-201ENST00000296129 CSNK2A2P19784 350 aaPredicted RBP16.8■□□□□ 0.28
CDCP1-201ENST00000296129 PREPP48147 710 aa16.8■□□□□ 0.28
CDCP1-201ENST00000296129 AGTR2P50052 363 aa16.8■□□□□ 0.28
CDCP1-201ENST00000296129 IFNLR1Q8IU57 520 aaPredicted RBP16.8■□□□□ 0.28
CDCP1-201ENST00000296129 TAPBPLQ9BX59 468 aa16.8■□□□□ 0.28
CDCP1-201ENST00000296129 PNO1Q9NRX1 252 aaKnown RBP16.8■□□□□ 0.28
CDCP1-201ENST00000296129 GIMAP2Q9UG22 337 aa16.8■□□□□ 0.28
CDCP1-201ENST00000296129 RFPL1O75677 317 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 HOXA11P31270 313 aaPredicted RBP16.79■□□□□ 0.28
CDCP1-201ENST00000296129 MLLT3P42568 568 aaPredicted RBP16.79■□□□□ 0.28
CDCP1-201ENST00000296129 MERTKQ12866 999 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 LIN54Q6MZP7 749 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 TFGQ92734 400 aaPredicted RBP16.79■□□□□ 0.28
CDCP1-201ENST00000296129 TUBGCP5Q96RT8 1024 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 GALNT8Q9NY28 637 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 SNX7Q9UNH6 387 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 TMED5Q9Y3A6 229 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 TFECO14948 347 aaPredicted RBP16.79■□□□□ 0.28
CDCP1-201ENST00000296129 SP140Q13342 867 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 USP30Q70CQ3 517 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 LRRC17Q8N6Y2 441 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 IMP4Q96G21 291 aaKnown RBP16.79■□□□□ 0.28
CDCP1-201ENST00000296129 WBP11Q9Y2W2 641 aaKnown RBP16.79■□□□□ 0.28
CDCP1-201ENST00000296129 TAF4O00268 1085 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 EBLN1P0CF75 366 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 GGT5P36269 586 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 RAB30Q15771 203 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 AGTRAPQ6RW13 159 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 ADGRG6Q86SQ4 1221 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 P2RX2Q9UBL9 471 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 SRPRAP08240 638 aaKnown RBP16.79■□□□□ 0.28
CDCP1-201ENST00000296129 FGF3P11487 239 aaPredicted RBP16.79■□□□□ 0.28
CDCP1-201ENST00000296129 DAG1Q14118 895 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 RAB6CQ53S08 254 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 HTRA1Q92743 480 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 IRF7Q92985 503 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 COL21A1Q96P44 957 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 RAB6CQ9H0N0 254 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 OR51V1Q9H2C8 321 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 UTS2RQ9UKP6 389 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 OAZ3Q9UMX2 235 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 MAN2B2Q9Y2E5 1009 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 ADAMTSL3P82987 1691 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 UBR2Q8IWV8 1755 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 MYH1P12882 1939 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 PDLIM1O00151 329 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 TBX10O75333 385 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 ALOX5P09917 674 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 CKMT2P17540 419 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 RPS13P62277 151 aaKnown RBP16.79■□□□□ 0.28
CDCP1-201ENST00000296129 MXD1Q05195 221 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 LMAN2Q12907 356 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 SUZ12Q15022 739 aaKnown RBP16.79■□□□□ 0.28
CDCP1-201ENST00000296129 LAPTM4BQ86VI4 370 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 IQCHQ86VS3 1027 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 TXNDC5Q8NBS9 432 aaKnown RBP16.79■□□□□ 0.28
CDCP1-201ENST00000296129 TMEM40Q8WWA1 233 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 CRYGNQ8WXF5 182 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 SMPDL3AQ92484 453 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 POPDC3Q9HBV1 291 aa16.79■□□□□ 0.28
CDCP1-201ENST00000296129 C2orf78A6NCI8 922 aa16.78■□□□□ 0.28
CDCP1-201ENST00000296129 STX16O14662 325 aa16.78■□□□□ 0.28
CDCP1-201ENST00000296129 TYROBPO43914 113 aa16.78■□□□□ 0.28
CDCP1-201ENST00000296129 PSIP1O75475 530 aaKnown RBP16.78■□□□□ 0.28
CDCP1-201ENST00000296129 PRKD3O94806 890 aa16.78■□□□□ 0.28
CDCP1-201ENST00000296129 BCHEP06276 602 aa16.78■□□□□ 0.28
CDCP1-201ENST00000296129 HNF1BP35680 557 aa16.78■□□□□ 0.28
CDCP1-201ENST00000296129 DNAJB13P59910 316 aa16.78■□□□□ 0.28
CDCP1-201ENST00000296129 PCBP2Q15366 365 aaKnown RBP eCLIP16.78■□□□□ 0.28
CDCP1-201ENST00000296129 NXPE1Q8N323 547 aa16.78■□□□□ 0.28
CDCP1-201ENST00000296129 KBTBD7Q8WVZ9 684 aa16.78■□□□□ 0.28
CDCP1-201ENST00000296129 SLC5A11Q8WWX8 675 aa16.78■□□□□ 0.28
CDCP1-201ENST00000296129 DIRAS2Q96HU8 199 aa16.78■□□□□ 0.28
CDCP1-201ENST00000296129 KCNC2Q96PR1 638 aa16.78■□□□□ 0.28
CDCP1-201ENST00000296129 PHF11Q9UIL8 331 aa16.78■□□□□ 0.28
CDCP1-201ENST00000296129 IRAK3Q9Y616 596 aa16.78■□□□□ 0.28
CDCP1-201ENST00000296129 HOXB2P14652 356 aa16.78■□□□□ 0.28
CDCP1-201ENST00000296129 PROZP22891 400 aa16.78■□□□□ 0.28
CDCP1-201ENST00000296129 GRK6P43250 576 aa16.78■□□□□ 0.28
CDCP1-201ENST00000296129 OR10H4Q8NGA5 316 aa16.78■□□□□ 0.28
CDCP1-201ENST00000296129 COPS4Q9BT78 406 aa16.78■□□□□ 0.28
CDCP1-201ENST00000296129 TIMMDC1Q9NPL8 285 aa16.78■□□□□ 0.28
CDCP1-201ENST00000296129 STK19P49842 368 aaPredicted RBP16.78■□□□□ 0.28
CDCP1-201ENST00000296129 MARCH7Q9H992 704 aa16.78■□□□□ 0.28
CDCP1-201ENST00000296129 SLC35C2Q9NQQ7 365 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms