RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ABRAXAS2Q15018 415 aa17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 PARP15Q460N3 678 aa17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 POP5Q969H6 163 aaKnown RBP17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 KIF17Q9P2E2 1029 aa17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 PSORS1C1Q9UIG5 152 aa17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 PRELID1Q9Y255 219 aa17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 A0A0G2JMP0 313 aa17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 LOC285095A0A1B0GVY8 99 aa17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 CTDSP2O14595 271 aa17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 DIRAS1O95057 198 aa17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 PGRP06401 933 aa17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 MARC1Q5VT66 337 aa17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 GPSM1Q86YR5 675 aa17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 P3H2Q8IVL5 708 aa17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 PGBD5Q8N414 524 aa17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 NKAPQ8N5F7 415 aaKnown RBP17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 ATG16L2Q8NAA4 619 aa17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 ZNF675Q8TD23 568 aa17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 RIPOR3Q96MK2 946 aa17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 CPPED1Q9BRF8 314 aaPredicted RBP17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 SLC30A2Q9BRI3 323 aa17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 PADI3Q9ULW8 664 aa17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 PCDHGB2Q9Y5G2 931 aa17.22■□□□□ 0.35
CDKN1B-201ENST00000228872 MEIOCA2RUB1 952 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 E9PAM4 449 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 UGT2B17O75795 530 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 ZNF682O95780 498 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 CNPP09543 421 aaKnown RBP17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 MYCLP1P12525 358 aaPredicted RBP17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 SLAMF1Q13291 335 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 FAM171A1Q5VUB5 890 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 MRPL10Q7Z7H8 261 aaKnown RBP17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 CEP19Q96LK0 163 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 DPY30Q9C005 99 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 ACOXLQ9NUZ1 547 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 E9PQ18 207 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 PER2O15055 1255 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 TSPAN12O95859 305 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 SOX6P35712 828 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 HNF4AP41235 474 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 AFF1P51825 1210 aaKnown RBP17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 NPRL3Q12980 569 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 IRF3Q14653 427 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 CYP4Z2PQ8N1L4 340 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 PAF1Q8N7H5 531 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 ARRDC2Q8TBH0 407 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 TADA1Q96BN2 335 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 PPP3R2Q96LZ3 170 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 SP110Q9HB58 689 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 IL1RAPQ9NPH3 570 aa17.21■□□□□ 0.35
CDKN1B-201ENST00000228872 hCG_2039718K7EN88 272 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 SLITRK5O94991 958 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 IL6P05231 212 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 CDK1P06493 297 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 PIRTP0C851 137 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 CD52P31358 61 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 HTR2BP41595 481 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 DSC3Q14574 896 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 KRTCAP2Q8N6L1 136 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 OR4F6Q8NGB9 312 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 PEX13Q92968 403 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 LPPQ93052 612 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 MYDGFQ969H8 173 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 HMCESQ96FZ2 354 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 KCNS3Q9BQ31 491 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 RANGRFQ9HD47 186 aaPredicted RBP17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 STARD7Q9NQZ5 370 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 SIRT5Q9NXA8 310 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 CCL27Q9Y4X3 112 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 PCDHGA6Q9Y5G7 932 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 TIMM13Q9Y5L4 95 aaPredicted RBP17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 NFE2Q16621 373 aaPredicted RBP17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 FBXO43Q4G163 708 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 TRAF7Q6Q0C0 670 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 SLC7A6Q92536 515 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 TTC9Q92623 222 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 GGHQ92820 318 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 FYTTD1Q96QD9 318 aaKnown RBP17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 DHRS9Q9BPW9 319 aa17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 SAMD4AQ9UPU9 718 aaKnown RBP17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 SAMHD1Q9Y3Z3 626 aaKnown RBP17.2■□□□□ 0.34
CDKN1B-201ENST00000228872 A0A0X1KG70 313 aa17.19■□□□□ 0.34
CDKN1B-201ENST00000228872 SLC12A8A0AV02 714 aa17.19■□□□□ 0.34
CDKN1B-201ENST00000228872 ZNF623O75123 536 aa17.19■□□□□ 0.34
CDKN1B-201ENST00000228872 MOCS2O96007 188 aaPredicted RBP17.19■□□□□ 0.34
CDKN1B-201ENST00000228872 VIPP01282 170 aa17.19■□□□□ 0.34
CDKN1B-201ENST00000228872 IL7P13232 177 aa17.19■□□□□ 0.34
CDKN1B-201ENST00000228872 TIE1P35590 1138 aa17.19■□□□□ 0.34
CDKN1B-201ENST00000228872 RGS6P49758 472 aa17.19■□□□□ 0.34
CDKN1B-201ENST00000228872 SMU1Q2TAY7 513 aa17.19■□□□□ 0.34
CDKN1B-201ENST00000228872 C18orf21Q32NC0 220 aaPredicted RBP17.19■□□□□ 0.34
CDKN1B-201ENST00000228872 ARMCX4Q5H9R4 360 aa17.19■□□□□ 0.34
CDKN1B-201ENST00000228872 ARMC4Q5T2S8 1044 aa17.19■□□□□ 0.34
CDKN1B-201ENST00000228872 DNAJC22Q8N4W6 341 aa17.19■□□□□ 0.34
CDKN1B-201ENST00000228872 GLB1L3Q8NCI6 653 aaPredicted RBP17.19■□□□□ 0.34
CDKN1B-201ENST00000228872 ST13P5Q8NFI4 369 aaPredicted RBP17.19■□□□□ 0.34
CDKN1B-201ENST00000228872 SMARCD1Q96GM5 515 aa17.19■□□□□ 0.34
CDKN1B-201ENST00000228872 TRNT1Q96Q11 434 aaKnown RBP17.19■□□□□ 0.34
CDKN1B-201ENST00000228872 OR52E6Q96RD3 313 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms