RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 GRIA3P42263 894 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 FNTAP49354 379 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 VPS41P49754 854 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 RGS4P49798 205 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 VSX2P58304 361 aaPredicted RBP6.25□□□□□ -1.41
FOXN3-205ENST00000553904 PRDX1Q06830 199 aaKnown RBP6.25□□□□□ -1.41
FOXN3-205ENST00000553904 ILF2Q12905 390 aaKnown RBP6.25□□□□□ -1.41
FOXN3-205ENST00000553904 CHAF1BQ13112 559 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 ATP1A4Q13733 1029 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 ELOAQ14241 798 aaKnown RBP6.25□□□□□ -1.41
FOXN3-205ENST00000553904 PPP1R7Q15435 360 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 TRIP13Q15645 432 aaPredicted RBP6.25□□□□□ -1.41
FOXN3-205ENST00000553904 INPP5JQ15735 1006 aaPredicted RBP6.25□□□□□ -1.41
FOXN3-205ENST00000553904 CYP1B1Q16678 543 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 NDUFA9Q16795 377 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 LONRF1Q17RB8 773 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 KLHL38Q2WGJ6 581 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 DEFB110Q30KQ9 67 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 AGAP7PQ5VUJ5 663 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 GARNL3Q5VVW2 1013 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 JMJD6Q6NYC1 403 aaPredicted RBP6.25□□□□□ -1.41
FOXN3-205ENST00000553904 MRPL14Q6P1L8 145 aaKnown RBP6.25□□□□□ -1.41
FOXN3-205ENST00000553904 IGFL3Q6UXB1 125 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 MRGPREQ86SM8 312 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 TRIM73Q86UV7 250 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 CILP2Q8IUL8 1156 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 PPIL6Q8IXY8 311 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 IQCKQ8N0W5 287 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 GALNT16Q8N428 558 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 PRELID2Q8N945 189 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 FBXO15Q8NCQ5 510 aaPredicted RBP6.25□□□□□ -1.41
FOXN3-205ENST00000553904 OR2L3Q8NG85 312 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 OR2A1Q8NGT9 310 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 ACTRT1Q8TDG2 376 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 LPGAT1Q92604 370 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 KCNJ9Q92806 393 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 INPP5DQ92835 1189 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 MIEF2Q96C03 454 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 MVB12AQ96EY5 273 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 HIST1H2AHQ96KK5 128 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 RUNDC3BQ96NL0 473 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 BIRC8Q96P09 236 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 AGAP4Q96P64 663 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 HIST1H2AJQ99878 128 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 ZFYVE21Q9BQ24 234 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 FAM167BQ9BTA0 163 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 H2AFJQ9BTM1 129 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 MENTQ9BUN1 341 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 TRIM54Q9BYV2 358 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 FAM129AQ9BZQ8 928 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 PCBD2Q9H0N5 130 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 SLC26A1Q9H2B4 701 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 AGPAT4Q9NRZ5 378 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 C20orf96Q9NUD7 363 aaPredicted RBP6.25□□□□□ -1.41
FOXN3-205ENST00000553904 SYBUQ9NX95 663 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 MAP10Q9P2G4 905 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 ZNF282Q9UDV7 671 aaPredicted RBP6.25□□□□□ -1.41
FOXN3-205ENST00000553904 CDC23Q9UJX2 597 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 PLAAQ9Y263 795 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 B3GNT3Q9Y2A9 372 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 DHRS7Q9Y394 339 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 MAP4K5Q9Y4K4 846 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 MAD1L1Q9Y6D9 718 aa6.25□□□□□ -1.41
FOXN3-205ENST00000553904 LAMA5O15230 3695 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 ZFC3H1O60293 1989 aaKnown RBP6.24□□□□□ -1.41
FOXN3-205ENST00000553904 A0A0J9YVX5 310 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 FITM1A5D6W6 292 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 GOLGA8KD6RF30 607 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 GOLGA8TH3BQL2 631 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 NIPSNAP2O75323 286 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 AVILO75366 819 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 SYF2O95926 243 aaKnown RBP6.24□□□□□ -1.41
FOXN3-205ENST00000553904 ANXA5P08758 320 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 EZRP15311 586 aaKnown RBP6.24□□□□□ -1.41
FOXN3-205ENST00000553904 TCP1P17987 556 aaKnown RBP6.24□□□□□ -1.41
FOXN3-205ENST00000553904 FDXRP22570 491 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 CCND1P24385 295 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 ITGA3P26006 1051 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 PEBP1P30086 187 aaKnown RBP6.24□□□□□ -1.41
FOXN3-205ENST00000553904 GRK3P35626 688 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 TERF1P54274 439 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 PNLIPRP1P54315 467 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 TSTA3Q13630 321 aaPredicted RBP6.24□□□□□ -1.41
FOXN3-205ENST00000553904 GRB7Q14451 532 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 GBX1Q14549 363 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 KCNJ11Q14654 390 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 SLC9A5Q14940 896 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 RBBP7Q16576 425 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 NKG7Q16617 165 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 NADK2Q4G0N4 442 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 CTSL3PQ5NE16 218 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 THEMIS2Q5TEJ8 643 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 PRAMEF13Q5VWM6 474 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 CPZQ66K79 652 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 FCRL6Q6DN72 434 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 ZNF470Q6ECI4 717 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 FBXO42Q6P3S6 717 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 CES3Q6UWW8 571 aa6.24□□□□□ -1.41
FOXN3-205ENST00000553904 SYDE1Q6ZW31 735 aaPredicted RBP6.24□□□□□ -1.41
FOXN3-205ENST00000553904 CENPUQ71F23 418 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms