RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 PSMB5P28074 263 aa20.09■□□□□ 0.81
CHKA-206ENST00000531341 ANP32AP39687 249 aaKnown RBP20.09■□□□□ 0.81
CHKA-206ENST00000531341 COPS2P61201 443 aa20.09■□□□□ 0.81
CHKA-206ENST00000531341 PLOD1Q02809 727 aaPredicted RBP20.09■□□□□ 0.81
CHKA-206ENST00000531341 DNAJC21Q5F1R6 531 aaKnown RBP20.09■□□□□ 0.81
CHKA-206ENST00000531341 YOD1Q5VVQ6 348 aaPredicted RBP20.09■□□□□ 0.81
CHKA-206ENST00000531341 GDF7Q7Z4P5 450 aa20.09■□□□□ 0.81
CHKA-206ENST00000531341 VSTM4Q8IW00 320 aa20.09■□□□□ 0.81
CHKA-206ENST00000531341 KBTBD2Q8IY47 623 aa20.09■□□□□ 0.81
CHKA-206ENST00000531341 TTC29Q8NA56 475 aaPredicted RBP20.09■□□□□ 0.81
CHKA-206ENST00000531341 OR2L8Q8NGY9 312 aa20.09■□□□□ 0.81
CHKA-206ENST00000531341 MIEF2Q96C03 454 aa20.09■□□□□ 0.81
CHKA-206ENST00000531341 ZNF304Q9HCX3 659 aa20.09■□□□□ 0.81
CHKA-206ENST00000531341 SH3BGRL2Q9UJC5 107 aa20.09■□□□□ 0.81
CHKA-206ENST00000531341 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.09■□□□□ 0.81
CHKA-206ENST00000531341 LOC105369274A0A096LPK9 316 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 LOC102723532A0A0G2JNH3 316 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 HYKKA2RU49 373 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 CCL21O00585 134 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 MAP2K7O14733 419 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 FFAR3O14843 346 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 GPR42O15529 346 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 KDM1AO60341 852 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 GPC4O75487 556 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 S1PR4O95977 384 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 TPM3P06753 285 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 CTNNA2P26232 953 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 YBX1P67809 324 aaKnown RBP20.08■□□□□ 0.81
CHKA-206ENST00000531341 SEMA3AQ14563 771 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 ZNF630Q2M218 657 aaPredicted RBP20.08■□□□□ 0.81
CHKA-206ENST00000531341 PARP6Q2NL67 630 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 FAM214AQ32MH5 1076 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 C11orf63Q6NUN7 778 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 BNC2Q6ZN30 1099 aaPredicted RBP20.08■□□□□ 0.81
CHKA-206ENST00000531341 NLRP9Q7RTR0 991 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 ZNF295-AS1Q8N0V1 137 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 OR4N4Q8N0Y3 316 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 TAB3Q8N5C8 712 aaPredicted RBP20.08■□□□□ 0.81
CHKA-206ENST00000531341 OR13J1Q8NGT2 312 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 HAS2Q92819 552 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 SLC22A18Q96BI1 424 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 TRIM8Q9BZR9 551 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 IL1RAPL1Q9NZN1 696 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 SLC2A6Q9UGQ3 507 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 ZC3H7BQ9UGR2 993 aaKnown RBP20.08■□□□□ 0.81
CHKA-206ENST00000531341 PCDHA3Q9Y5H8 950 aa20.08■□□□□ 0.81
CHKA-206ENST00000531341 NSG1A0A0A6YYJ2 146 aa20.07■□□□□ 0.8
CHKA-206ENST00000531341 TRAV17A0A0B4J275 112 aa20.07■□□□□ 0.8
CHKA-206ENST00000531341 DYTNA2CJ06 578 aa20.07■□□□□ 0.8
CHKA-206ENST00000531341 RASGRF2O14827 1237 aa20.07■□□□□ 0.8
CHKA-206ENST00000531341 CTNNA1P35221 906 aaKnown RBP20.07■□□□□ 0.8
CHKA-206ENST00000531341 PTGER4P35408 488 aa20.07■□□□□ 0.8
CHKA-206ENST00000531341 CARSP49589 748 aaKnown RBP20.07■□□□□ 0.8
CHKA-206ENST00000531341 CCSMST1Q4G0I0 132 aa20.07■□□□□ 0.8
CHKA-206ENST00000531341 TMEM207Q6UWW9 146 aa20.07■□□□□ 0.8
CHKA-206ENST00000531341 NDUFAF7Q7L592 441 aa20.07■□□□□ 0.8
CHKA-206ENST00000531341 PPP1R2P1Q96PQ5 205 aa20.07■□□□□ 0.8
CHKA-206ENST00000531341 INTS7Q9NVH2 962 aaKnown RBP20.07■□□□□ 0.8
CHKA-206ENST00000531341 ZNF282Q9UDV7 671 aaPredicted RBP20.07■□□□□ 0.8
CHKA-206ENST00000531341 EFR3BQ9Y2G0 817 aa20.07■□□□□ 0.8
CHKA-206ENST00000531341 A0A0J9YVX5 310 aa20.06■□□□□ 0.8
CHKA-206ENST00000531341 USP1O94782 785 aa20.06■□□□□ 0.8
CHKA-206ENST00000531341 GOT2P00505 430 aaKnown RBP20.06■□□□□ 0.8
CHKA-206ENST00000531341 CA7P43166 264 aa20.06■□□□□ 0.8
CHKA-206ENST00000531341 GDF10P55107 478 aa20.06■□□□□ 0.8
CHKA-206ENST00000531341 OCA2Q04671 838 aa20.06■□□□□ 0.8
CHKA-206ENST00000531341 EEF1A2Q05639 463 aaKnown RBP20.06■□□□□ 0.8
CHKA-206ENST00000531341 CDSNQ15517 529 aa20.06■□□□□ 0.8
CHKA-206ENST00000531341 DCUN1D3Q8IWE4 304 aa20.06■□□□□ 0.8
CHKA-206ENST00000531341 KRT222Q8N1A0 295 aa20.06■□□□□ 0.8
CHKA-206ENST00000531341 ZNF808Q8N4W9 903 aaPredicted RBP20.06■□□□□ 0.8
CHKA-206ENST00000531341 FAM71DQ8N9W8 422 aa20.06■□□□□ 0.8
CHKA-206ENST00000531341 OR52K1Q8NGK4 314 aa20.06■□□□□ 0.8
CHKA-206ENST00000531341 HDAC10Q969S8 669 aa20.06■□□□□ 0.8
CHKA-206ENST00000531341 ZUFSPQ96AP4 578 aa20.06■□□□□ 0.8
CHKA-206ENST00000531341 VPS50Q96JG6 964 aa20.06■□□□□ 0.8
CHKA-206ENST00000531341 C10orf90Q96M02 699 aa20.06■□□□□ 0.8
CHKA-206ENST00000531341 ZNF778Q96MU6 729 aa20.06■□□□□ 0.8
CHKA-206ENST00000531341 ALS2CR12Q96Q35 445 aa20.06■□□□□ 0.8
CHKA-206ENST00000531341 MIPEPQ99797 713 aa20.06■□□□□ 0.8
CHKA-206ENST00000531341 SYNPO2LQ9H987 977 aa20.06■□□□□ 0.8
CHKA-206ENST00000531341 LRRC40Q9H9A6 602 aa20.06■□□□□ 0.8
CHKA-206ENST00000531341 IGSF5Q9NSI5 407 aa20.06■□□□□ 0.8
CHKA-206ENST00000531341 SUCOQ9UBS9 1254 aaKnown RBP20.06■□□□□ 0.8
CHKA-206ENST00000531341 TARM1B6A8C7 271 aa20.05■□□□□ 0.8
CHKA-206ENST00000531341 C19orf84I3L1E1 186 aa20.05■□□□□ 0.8
CHKA-206ENST00000531341 SRPX2O60687 465 aaPredicted RBP20.05■□□□□ 0.8
CHKA-206ENST00000531341 WDPCPO95876 746 aa20.05■□□□□ 0.8
CHKA-206ENST00000531341 EIF2S1P05198 315 aaKnown RBP20.05■□□□□ 0.8
CHKA-206ENST00000531341 COX6B1P14854 86 aa20.05■□□□□ 0.8
CHKA-206ENST00000531341 PTPN7P35236 360 aa20.05■□□□□ 0.8
CHKA-206ENST00000531341 EFNA3P52797 238 aa20.05■□□□□ 0.8
CHKA-206ENST00000531341 KRTAP10-9P60411 292 aa20.05■□□□□ 0.8
CHKA-206ENST00000531341 FAAH2Q6GMR7 532 aa20.05■□□□□ 0.8
CHKA-206ENST00000531341 ZNF534Q76KX8 674 aa20.05■□□□□ 0.8
CHKA-206ENST00000531341 LRRC45Q96CN5 670 aa20.05■□□□□ 0.8
CHKA-206ENST00000531341 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.05■□□□□ 0.8
CHKA-206ENST00000531341 CHST11Q9NPF2 352 aa20.05■□□□□ 0.8
CHKA-206ENST00000531341 SEC14L3Q9UDX4 400 aa20.05■□□□□ 0.8
CHKA-206ENST00000531341 SLC39A10Q9ULF5 831 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 185.3 ms