RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 PRSS36Q5K4E3 855 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 FAM171A1Q5VUB5 890 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 OVOS1Q6IE37 1185 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 CD300LGQ6UXG3 332 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 P3H2Q8IVL5 708 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 DNAJC22Q8N4W6 341 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 TMCO6Q96DC7 493 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 EPYCQ99645 322 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 TINF2Q9BSI4 451 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 EHD3Q9NZN3 535 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 KIF17Q9P2E2 1029 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 AGO1Q9UL18 857 aaKnown RBP17.29■□□□□ 0.36
NUP54-205ENST00000507257 WBP11Q9Y2W2 641 aaKnown RBP17.29■□□□□ 0.36
NUP54-205ENST00000507257 SAMHD1Q9Y3Z3 626 aaKnown RBP17.29■□□□□ 0.36
NUP54-205ENST00000507257 OARD1Q9Y530 152 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 PCDHGA6Q9Y5G7 932 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 A0A075B6Q4 140 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 PLK4O00444 970 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 TAPBPO15533 448 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 OR1I1O60431 355 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 BCKDHAP12694 445 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 TYMPP19971 482 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 OR2B6P58173 313 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 IL1RL1Q01638 556 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 EIF4HQ15056 248 aaKnown RBP17.29■□□□□ 0.36
NUP54-205ENST00000507257 INO80DQ53TQ3 878 aaPredicted RBP17.29■□□□□ 0.36
NUP54-205ENST00000507257 SPANXN2Q5MJ10 180 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 ATAD3CQ5T2N8 411 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 EIF3MQ7L2H7 374 aaKnown RBP17.29■□□□□ 0.36
NUP54-205ENST00000507257 MRPL10Q7Z7H8 261 aaKnown RBP17.29■□□□□ 0.36
NUP54-205ENST00000507257 SYTL1Q8IYJ3 562 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 ATG16L2Q8NAA4 619 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 FLCNQ8NFG4 579 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 OR7G1Q8NGA0 311 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 CHTF18Q8WVB6 975 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 RMDN1Q96DB5 314 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 CRELD1Q96HD1 420 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 COL21A1Q96P44 957 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 FBXO44Q9H4M3 255 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 REEP1Q9H902 201 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 AASDHPPTQ9NRN7 309 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 CLCA1A8K7I4 914 aa17.28■□□□□ 0.36
NUP54-205ENST00000507257 GPR182O15218 404 aa17.28■□□□□ 0.36
NUP54-205ENST00000507257 GUCY1B2O75343 617 aa17.28■□□□□ 0.36
NUP54-205ENST00000507257 ACPPP15309 386 aa17.28■□□□□ 0.36
NUP54-205ENST00000507257 CR2P20023 1033 aa17.28■□□□□ 0.36
NUP54-205ENST00000507257 PRPH2P23942 346 aa17.28■□□□□ 0.36
NUP54-205ENST00000507257 EPHA2P29317 976 aa17.28■□□□□ 0.36
NUP54-205ENST00000507257 OR1E1P30953 314 aa17.28■□□□□ 0.36
NUP54-205ENST00000507257 SOX6P35712 828 aa17.28■□□□□ 0.36
NUP54-205ENST00000507257 RPS14P62263 151 aaKnown RBP17.28■□□□□ 0.36
NUP54-205ENST00000507257 STARD3Q14849 445 aa17.28■□□□□ 0.36
NUP54-205ENST00000507257 CDK10Q15131 360 aa17.28■□□□□ 0.36
NUP54-205ENST00000507257 C19orf48Q6RUI8 117 aa17.28■□□□□ 0.36
NUP54-205ENST00000507257 CBLL1Q75N03 491 aa17.28■□□□□ 0.36
NUP54-205ENST00000507257 ZSWIM9Q86XI8 627 aa17.28■□□□□ 0.36
NUP54-205ENST00000507257 RGL4Q8IZJ4 473 aa17.28■□□□□ 0.36
NUP54-205ENST00000507257 GPC2Q8N158 579 aa17.28■□□□□ 0.36
NUP54-205ENST00000507257 CELF2-AS1Q8N7Q2 184 aa17.28■□□□□ 0.36
NUP54-205ENST00000507257 SLC10A4Q96EP9 437 aa17.28■□□□□ 0.36
NUP54-205ENST00000507257 CDK5RAP1Q96SZ6 601 aaKnown RBP17.28■□□□□ 0.36
NUP54-205ENST00000507257 QPCTLQ9NXS2 382 aa17.28■□□□□ 0.36
NUP54-205ENST00000507257 CFL2Q9Y281 166 aa17.28■□□□□ 0.36
NUP54-205ENST00000507257 MYO1GB0I1T2 1018 aa17.27■□□□□ 0.36
NUP54-205ENST00000507257 NPIPB8E9PQR5 432 aa17.27■□□□□ 0.36
NUP54-205ENST00000507257 MANBAO00462 879 aa17.27■□□□□ 0.36
NUP54-205ENST00000507257 UGT2B17O75795 530 aa17.27■□□□□ 0.36
NUP54-205ENST00000507257 B3GAT3O94766 335 aa17.27■□□□□ 0.36
NUP54-205ENST00000507257 ZNF682O95780 498 aa17.27■□□□□ 0.36
NUP54-205ENST00000507257 IGLV3-27P01718 113 aa17.27■□□□□ 0.36
NUP54-205ENST00000507257 MYCLP1P12525 358 aaPredicted RBP17.27■□□□□ 0.36
NUP54-205ENST00000507257 GGT2P36268 569 aa17.27■□□□□ 0.36
NUP54-205ENST00000507257 GPR50Q13585 617 aa17.27■□□□□ 0.36
NUP54-205ENST00000507257 IRF3Q14653 427 aa17.27■□□□□ 0.36
NUP54-205ENST00000507257 C18orf21Q32NC0 220 aaPredicted RBP17.27■□□□□ 0.36
NUP54-205ENST00000507257 RAP1GAP2Q684P5 730 aa17.27■□□□□ 0.36
NUP54-205ENST00000507257 SDHCQ99643 169 aaPredicted RBP17.27■□□□□ 0.36
NUP54-205ENST00000507257 CD244Q9BZW8 370 aa17.27■□□□□ 0.36
NUP54-205ENST00000507257 MARCH7Q9H992 704 aa17.27■□□□□ 0.36
NUP54-205ENST00000507257 RASSF1Q9NS23 344 aa17.27■□□□□ 0.36
NUP54-205ENST00000507257 THUMPD1Q9NXG2 353 aaKnown RBP17.27■□□□□ 0.36
NUP54-205ENST00000507257 SPASTQ9UBP0 616 aa17.27■□□□□ 0.36
NUP54-205ENST00000507257 FKBPLQ9UIM3 349 aa17.27■□□□□ 0.36
NUP54-205ENST00000507257 ZMYM5Q9UJ78 669 aa17.27■□□□□ 0.36
NUP54-205ENST00000507257 ZNF490Q9ULM2 529 aaPredicted RBP17.27■□□□□ 0.36
NUP54-205ENST00000507257 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.27■□□□□ 0.36
NUP54-205ENST00000507257 C17orf102A2RUQ5 167 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 ADM5C9JUS6 153 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 INSIG1O15503 277 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 ALX3O95076 343 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 PRLP01236 227 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 HOXD9P28356 352 aaPredicted RBP17.27■□□□□ 0.35
NUP54-205ENST00000507257 TIE1P35590 1138 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 SLC15A1P46059 708 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 BRCC3P46736 316 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 PRIM2P49643 509 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 VLDLRP98155 873 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 HMGCS1Q01581 520 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 LAPTM4AQ15012 233 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 VMACQ2NL98 169 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms