RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 LIPIQ6XZB0 460 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 DPPA4Q7L190 304 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 TRAM1L1Q8N609 369 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 HIST1H2AHQ96KK5 128 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 HIST1H2AJQ99878 128 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 INPP5KQ9BT40 448 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 H2AFJQ9BTM1 129 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 TBCDQ9BTW9 1192 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 ELOVL6Q9H5J4 265 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 ZNF696Q9H7X3 374 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 FBXO10Q9UK96 956 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 PCDHB3Q9Y5E6 796 aa14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 MUC22E2RYF6 1773 aaPredicted RBP14.76□□□□□ -0.05
SCAMP4-202ENST00000409472 KIAA1549LQ6ZVL6 1849 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 E7EQ34 232 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 SH3BGRLO75368 114 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 SOD1P00441 154 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 KRT6AP02538 564 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 KRT6BP04259 564 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 ELFN1P0C7U0 828 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 MPC1LP0DKB6 136 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 HOXA9P31269 272 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 CDKN2CP42773 168 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 KRT6CP48668 564 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 APOFQ13790 326 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 MAPKAPK3Q16644 382 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 CACHD1Q5VU97 1274 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 TBPL2Q6SJ96 375 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 RNF165Q6ZSG1 346 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 CYP2U1Q7Z449 544 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 RASGRP3Q8IV61 690 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 RAVER1Q8IY67 606 aaKnown RBP14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 DNAJC5GQ8N7S2 189 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 DHRS1Q96LJ7 313 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 APOLD1Q96LR9 279 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 RNF145Q96MT1 663 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 OSBPL11Q9BXB4 747 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 SERHLQ9NQF3 203 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 TMEM45AQ9NWC5 275 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 FAM32AQ9Y421 112 aaKnown RBP14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 A0A1W2PQ67 120 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 EIF3FO00303 357 aaPredicted RBP14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 XPAP23025 273 aaPredicted RBP14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 SLC5A2P31639 672 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 NR1H2P55055 460 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 RPS14P62263 151 aaKnown RBP14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 CHIT1Q13231 466 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 SLC14A1Q13336 389 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 GAB4Q2WGN9 574 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 METTL2BQ6P1Q9 378 aaKnown RBP14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 DHRS4L2Q6PKH6 230 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 ENPP6Q6UWR7 440 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 PLPP6Q8IY26 295 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 ZNF548Q8NEK5 533 aaPredicted RBP14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 BTN2A2Q8WVV5 523 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 AP2M1Q96CW1 435 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 CENPNQ96H22 339 aaPredicted RBP14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 COX4I2Q96KJ9 171 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 OR52E6Q96RD3 313 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 ZBTB18Q99592 522 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 DNAJC11Q9NVH1 559 aa14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 MAGED1Q9Y5V3 778 aaPredicted RBP14.75□□□□□ -0.05
SCAMP4-202ENST00000409472 DYTNA2CJ06 578 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 GRXCR2A6NFK2 248 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 CFAP99D6REC4 459 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 H0YJX3 145 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 SLCO2B1O94956 709 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 NPPAP01160 153 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 GSTM1P09488 218 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 GGT1P19440 569 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 CYP2A7P20853 494 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 NFKBIAP25963 317 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 NNMTP40261 264 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 TMED10P49755 219 aaKnown RBP14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 CYP4F3Q08477 520 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 INAQ16352 499 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 SPATS1Q496A3 300 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 L3MBTL4Q8NA19 623 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 FAM47BQ8NA70 645 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 FIG4Q92562 907 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 TFAP2CQ92754 450 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 GLYATL1Q969I3 302 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 FBXL20Q96IG2 436 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 NSMCE2Q96MF7 247 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 OR4K3Q96R72 315 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 ZSCAN5AQ9BUG6 496 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 THUMPD3Q9BV44 507 aaKnown RBP14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 CHID1Q9BWS9 393 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 CERS4Q9HA82 394 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 OLAHQ9NV23 265 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 ASIC5Q9NY37 505 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 GPRC5BQ9NZH0 403 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 TRBV5-3A0A0A0MS03 114 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 PCSK6P29122 969 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 SP140Q13342 867 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 DDX39BQ13838 428 aaKnown RBP14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 ZNF284Q2VY69 593 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 GGTA1PQ4G0N0 100 aa14.74□□□□□ -0.05
SCAMP4-202ENST00000409472 SYTL3Q4VX76 610 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms