RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 NME7Q9Y5B8 376 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 CLCA3PQ9Y6N3 262 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 H3BM21 787 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 LINC01387J3KSC0 135 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 TRIM3O75382 744 aaPredicted RBP12.47□□□□□ -0.41
HERC3-203ENST00000407637 GPX5O75715 221 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 MTHFD2P13995 350 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 ADORA2BP29275 332 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 CLCN7P51798 805 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 MAP2K6P52564 334 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 EFNA5P52803 228 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 NRG1Q02297 640 aaPredicted RBP12.47□□□□□ -0.41
HERC3-203ENST00000407637 DGKZQ13574 1117 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 C6orf136Q5SQH8 315 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 CACHD1Q5VU97 1274 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 NADSYN1Q6IA69 706 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 GPR153Q6NV75 609 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 ANKRD54Q6NXT1 300 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 SNX20Q7Z614 316 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 DNAJC22Q8N4W6 341 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 ST8SIA4Q92187 359 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 GPR137Q96N19 417 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 CNPPD1Q9BV87 410 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 CDT1Q9H211 546 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 ACTL8Q9H568 366 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 IFT22Q9H7X7 185 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 IL1RAPQ9NPH3 570 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 SIRT5Q9NXA8 310 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 RIMKLBQ9ULI2 386 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 ZNF490Q9ULM2 529 aaPredicted RBP12.47□□□□□ -0.41
HERC3-203ENST00000407637 PCDHGA6Q9Y5G7 932 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 KLK4Q9Y5K2 254 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 CCL22O00626 93 aa12.46□□□□□ -0.41
HERC3-203ENST00000407637 WISP3O95389 354 aaPredicted RBP12.46□□□□□ -0.41
HERC3-203ENST00000407637 G6PDP11413 515 aa12.46□□□□□ -0.41
HERC3-203ENST00000407637 DNAJB2P25686 324 aa12.46□□□□□ -0.41
HERC3-203ENST00000407637 MATKP42679 507 aa12.46□□□□□ -0.41
HERC3-203ENST00000407637 CCT3P49368 545 aaKnown RBP12.46□□□□□ -0.41
HERC3-203ENST00000407637 TPI1P60174 286 aa12.46□□□□□ -0.41
HERC3-203ENST00000407637 SEMA3AQ14563 771 aa12.46□□□□□ -0.41
HERC3-203ENST00000407637 SLC25A52Q3SY17 297 aa12.46□□□□□ -0.41
HERC3-203ENST00000407637 CYP27C1Q4G0S4 372 aa12.46□□□□□ -0.41
HERC3-203ENST00000407637 TOR1AIP1Q5JTV8 583 aa12.46□□□□□ -0.41
HERC3-203ENST00000407637 SMYD5Q6GMV2 418 aa12.46□□□□□ -0.41
HERC3-203ENST00000407637 GCNT7Q6ZNI0 430 aa12.46□□□□□ -0.41
HERC3-203ENST00000407637 PDZD4Q76G19 769 aaPredicted RBP12.46□□□□□ -0.41
HERC3-203ENST00000407637 HDDC2Q7Z4H3 204 aa12.46□□□□□ -0.41
HERC3-203ENST00000407637 GPAT4Q86UL3 456 aa12.46□□□□□ -0.41
HERC3-203ENST00000407637 CDAN1Q8IWY9 1227 aa12.46□□□□□ -0.41
HERC3-203ENST00000407637 FAM217AQ8IXS0 508 aa12.46□□□□□ -0.41
HERC3-203ENST00000407637 CELF6Q96J87 481 aaKnown RBP12.46□□□□□ -0.41
HERC3-203ENST00000407637 HYLS1Q96M11 299 aa12.46□□□□□ -0.41
HERC3-203ENST00000407637 OR5M11Q96RB7 305 aa12.46□□□□□ -0.41
HERC3-203ENST00000407637 HBEGFQ99075 208 aa12.46□□□□□ -0.41
HERC3-203ENST00000407637 PITX2Q99697 317 aa12.46□□□□□ -0.41
HERC3-203ENST00000407637 ASPNQ9BXN1 380 aa12.46□□□□□ -0.41
HERC3-203ENST00000407637 GALNT9Q9HCQ5 603 aa12.46□□□□□ -0.41
HERC3-203ENST00000407637 ZNF277Q9NRM2 450 aaPredicted RBP12.46□□□□□ -0.41
HERC3-203ENST00000407637 OLA1Q9NTK5 396 aaKnown RBP12.46□□□□□ -0.41
HERC3-203ENST00000407637 FAM105AQ9NUU6 356 aa12.46□□□□□ -0.41
HERC3-203ENST00000407637 RPS10-NUDT3A0A1W2PQS6 291 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 GRXCR2A6NFK2 248 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 MYL12BO14950 172 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 RFPL3O75679 317 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 PDE9AO76083 593 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 RETP07949 1114 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 MYL12AP19105 171 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 GPC1P35052 558 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 RRAS2P62070 204 aaPredicted RBP12.46□□□□□ -0.42
HERC3-203ENST00000407637 NPRL3Q12980 569 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 DOC2BQ14184 412 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 MED22Q15528 200 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.46□□□□□ -0.42
HERC3-203ENST00000407637 GLYR1Q49A26 553 aaPredicted RBP12.46□□□□□ -0.42
HERC3-203ENST00000407637 GTDC1Q4AE62 458 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 PDZK1Q5T2W1 519 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 ABI3BPQ7Z7G0 1075 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 SLC44A2Q8IWA5 706 aaPredicted RBP12.46□□□□□ -0.42
HERC3-203ENST00000407637 C10orf111Q8N326 155 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 STX19Q8N4C7 294 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 CERKQ8TCT0 537 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 PYURFQ96I23 114 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 SENP8Q96LD8 212 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 PAK6Q9NQU5 681 aaPredicted RBP12.46□□□□□ -0.42
HERC3-203ENST00000407637 RAD18Q9NS91 495 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 SNTG1Q9NSN8 517 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 IKZF3Q9UKT9 509 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 SBF1O95248 1867 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 UBR3Q6ZT12 1888 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 PARP14Q460N5 1801 aa12.46□□□□□ -0.42
HERC3-203ENST00000407637 TP53BP1Q12888 1972 aaPredicted RBP12.45□□□□□ -0.42
HERC3-203ENST00000407637 CLCA1A8K7I4 914 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 SUPT3HB4E1H0 165 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 FZD9O00144 591 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 ARNTLO00327 626 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 NUPL2O15504 423 aaKnown RBP12.45□□□□□ -0.42
HERC3-203ENST00000407637 VPS26AO75436 327 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 ZNF682O95780 498 aa12.45□□□□□ -0.42
HERC3-203ENST00000407637 CNPP09543 421 aaKnown RBP12.45□□□□□ -0.42
HERC3-203ENST00000407637 SNX16P57768 344 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms