RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Olfr1322Q7TQW3 310 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 D3Ertd751eQ8BGN2 192 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Pgm2l1Q8CAA7 621 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Aqp12Q8CHJ2 290 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Trpv3Q8K424 791 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Ptgr1Q91YR9 329 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 LipfQ9CPP7 395 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Hyal6Q9D4E9 494 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 VapaQ9WV55 249 aaKnown RBP14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Anapc1P53995 1944 aaKnown RBP14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Gm45233A0A0N4SVE0 221 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Map7d3A2AEY4 876 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Adamtsl5D3Z689 485 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Polr2jO08740 117 aaKnown RBP14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Pde9aO70628 534 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 P06324 132 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Clec2lP0C7M9 211 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Hoxb9P20615 250 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 BdnfP21237 249 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Gli1P47806 1111 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 StimateQ3UF25 288 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Rbm44Q3V089 1013 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Stox2Q499E5 926 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Tmem151bQ68FE7 561 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Snx32Q80ZJ7 404 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Cfap20Q8BTU1 193 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 PigwQ8C398 503 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Scamp1Q8K021 338 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Olfr1093Q8VF14 322 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Olfr808Q8VGI8 312 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Olfr535Q8VGL3 312 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Lman2Q9DBH5 358 aaKnown RBP14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Slc23a2Q9EPR4 648 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Katna1Q9WV86 491 aa14.39□□□□□ -0.11
Nup88-202ENSMUST00000108530 Gm29776A0A286YEC0 699 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Lgr4A2ARI4 951 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Dlgap4B1AZP2 992 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Gm10800D3Z496 220 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Galnt9G3X942 604 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 IkbkgO88522 412 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Ptchd3Q0EEE2 906 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Mat2aQ3THS6 395 aaKnown RBP14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Rnf223Q3UV31 285 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Krtcap2Q5RL79 136 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Dnajc11Q5U458 559 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Tas2r39Q7TQA5 319 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Cxcr1Q810W6 351 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Susd6Q8BGE4 302 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Npsr1Q8BZP8 371 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Trnt1Q8K1J6 434 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Agfg1Q8K2K6 561 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Mthfd1Q922D8 935 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Ggt7Q99JP7 662 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 4930519G04RikQ9CPT7 205 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Ttyh1Q9D3A9 450 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Cyb5r1Q9DB73 305 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Bdp1Q571C7 2467 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Dock6Q8VDR9 2080 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Unc13cQ8K0T7 2210 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Znf711A2ANX9 761 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Zfp938E9Q9G3 579 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Gm20509G3UZF1 325 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Vmn1r168K7N6B6 309 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Znf143O70230 638 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 M6prP24668 278 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Tnfrsf4P47741 272 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Emx2Q04744 253 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Lrrc58Q3UGP9 366 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Fzd3Q61086 666 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Map2k2Q63932 401 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Lix1Q6P566 282 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Mvb12aQ78HU3 271 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Olfr384Q7TRX8 312 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Olfr309Q7TS01 308 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Tmem121Q80XA0 318 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Trim50Q810I2 483 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Sphk1Q8CI15 382 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Olfr659Q8VGV6 322 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Dpy30Q99LT0 99 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Ap4s1Q9WVL1 144 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Lrrc37aB1AWG4 3215 aa14.38□□□□□ -0.11
Nup88-202ENSMUST00000108530 Gm6685D3YYP3 228 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Atp6ap1lD3Z5W0 336 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Spata31d1cE9QAF1 853 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Lrrc31F6VYM1 502 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Hmgxb3G3X9M3 1254 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Gm29394H3BIW7 199 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Gm379J3QQ19 296 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Sat1P48026 171 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Usp22Q5DU02 525 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Utp14bQ6EJB6 756 aaKnown RBP14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Tas2r131Q7M708 310 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Olfr1418Q7TQS3 318 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Galnt7Q80VA0 657 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Hus1Q8BQY8 280 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Kyat1Q8BTY1 424 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Pabpc5Q8C7D3 381 aaKnown RBP14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Lin7aQ8JZS0 233 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Creb5Q8K1L0 357 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Vmn1r71Q8VIC0 307 aa14.37□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms