RNA–Protein interactions for RNA: ENST00000640610.1

PAX6-273, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,730 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-273ENST00000640610 USP22Q9UPT9 525 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 RAI2Q9Y5P3 530 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 MAGED1Q9Y5V3 778 aaPredicted RBP9.3□□□□□ -0.92
PAX6-273ENST00000640610 ZNF840PA6NDX5 716 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 KDELR3O43731 214 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 STC2O76061 302 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 ANGPTL1O95841 491 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 TSPAN12O95859 305 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 MZF1P28698 734 aaPredicted RBP9.3□□□□□ -0.92
PAX6-273ENST00000640610 TUBA1BP68363 451 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 HTRA4P83105 476 aaPredicted RBP9.3□□□□□ -0.92
PAX6-273ENST00000640610 CHRNEQ04844 493 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 CARTPTQ16568 116 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 AAK1Q2M2I8 961 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 ZRANB3Q5FWF4 1079 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 STEAP3Q658P3 488 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 TUBA1AQ71U36 451 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 NAT16Q8N8M0 369 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 ASCC1Q8N9N2 400 aaKnown RBP9.3□□□□□ -0.92
PAX6-273ENST00000640610 SETD9Q8NE22 299 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 FBLIM1Q8WUP2 373 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 ISG20Q96AZ6 181 aaKnown RBP9.3□□□□□ -0.92
PAX6-273ENST00000640610 EID2BQ96D98 161 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 IGSF21Q96ID5 467 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 MAGEH1Q9H213 219 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 KAT8Q9H7Z6 458 aaKnown RBP9.3□□□□□ -0.92
PAX6-273ENST00000640610 SMURF2Q9HAU4 748 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 CCDC177Q9NQR7 707 aaPredicted RBP9.3□□□□□ -0.92
PAX6-273ENST00000640610 TAS2R13Q9NYV9 303 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 SLAMF8Q9P0V8 285 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 SLCO3A1Q9UIG8 710 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 ZNF221Q9UK13 617 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 ANGPTL3Q9Y5C1 460 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 ORC6Q9Y5N6 252 aa9.3□□□□□ -0.92
PAX6-273ENST00000640610 CHD5Q8TDI0 1954 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 PLXNA4Q9HCM2 1894 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 A6NL46 340 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 SLC16A6O15403 523 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 HOXC11O43248 304 aaPredicted RBP9.29□□□□□ -0.92
PAX6-273ENST00000640610 TBX1O43435 398 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 MRPS14O60783 128 aaKnown RBP9.29□□□□□ -0.92
PAX6-273ENST00000640610 SLC22A3O75751 556 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 EFEMP2O95967 443 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 CST1P01037 141 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 PRR35P0CG20 571 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 PCNAP12004 261 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 CTPS1P17812 591 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 CASP2P42575 452 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 POLR2JP52435 117 aaKnown RBP9.29□□□□□ -0.92
PAX6-273ENST00000640610 CDH4P55283 916 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 NCS1P62166 190 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 FADDQ13158 208 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 TAF1AQ15573 450 aaPredicted RBP9.29□□□□□ -0.92
PAX6-273ENST00000640610 ZNF404Q494X3 552 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 C5orf22Q49AR2 442 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 ZC3H12BQ5HYM0 836 aaKnown RBP9.29□□□□□ -0.92
PAX6-273ENST00000640610 C9orf50Q5SZB4 431 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 ATXN7L2Q5T6C5 722 aaPredicted RBP9.29□□□□□ -0.92
PAX6-273ENST00000640610 DESI1Q6ICB0 168 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 CXorf57Q6NSI4 855 aaKnown RBP9.29□□□□□ -0.92
PAX6-273ENST00000640610 AFTPHQ6ULP2 937 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 EFL1Q7Z2Z2 1120 aaKnown RBP9.29□□□□□ -0.92
PAX6-273ENST00000640610 CCDC103Q8IW40 242 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 DTWD1Q8N5C7 304 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 RHEBL1Q8TAI7 183 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 RASSF5Q8WWW0 418 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 LGALS12Q96DT0 336 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 ZHX1-C8orf76Q96EF9 292 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 ALOXE3Q9BYJ1 711 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 BRINP2Q9C0B6 783 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 DERL2Q9GZP9 239 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 INTS7Q9NVH2 962 aaKnown RBP9.29□□□□□ -0.92
PAX6-273ENST00000640610 ZIM2Q9NZV7 527 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 EIF2B4Q9UI10 523 aaKnown RBP9.29□□□□□ -0.92
PAX6-273ENST00000640610 FCF1Q9Y324 198 aaKnown RBP9.29□□□□□ -0.92
PAX6-273ENST00000640610 A3GALT2U3KPV4 340 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 LCHNA4D1U4 455 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 AGAP5A6NIR3 686 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 CLDN24A6NM45 220 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 K7ERQ8 282 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 GNGT2O14610 69 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 NOBOXO60393 691 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 PRKD3O94806 890 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 ALPIP09923 528 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 LINC00271P0C7V0 271 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 JUNDP17535 347 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 GGT1P19440 569 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 PSMB9P28065 219 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 ZFP36L2P47974 494 aaKnown RBP9.29□□□□□ -0.92
PAX6-273ENST00000640610 SLC11A2P49281 568 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 DEFA1P59665 94 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 DEFA3P59666 94 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 CXCR4P61073 352 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 RAD51Q06609 339 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 LCP2Q13094 533 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 CDK5R2Q13319 367 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 PLD1Q13393 1074 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 CLCA4Q14CN2 919 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 PLEKHG6Q3KR16 790 aa9.29□□□□□ -0.92
PAX6-273ENST00000640610 HABP4Q5JVS0 413 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms