RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 PRRG4Q9BZD6 226 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 ARRDC1-AS1Q9H2J1 176 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 YY1AP1Q9H869 796 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 Q9H8V8 135 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 PNPLA3Q9NST1 481 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 FETUBQ9UGM5 382 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 CHKBQ9Y259 395 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 DCAF1Q9Y4B6 1507 aa4.81□□□□□ -1.64
LINC00397-202ENST00000606785 C5orf60A6NFR6 353 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 CASTOR2A6NHX0 329 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 GAPDHSO14556 408 aaPredicted RBP4.8□□□□□ -1.64
LINC00397-202ENST00000606785 CAPN9O14815 690 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 RNASEH1O60930 286 aaKnown RBP4.8□□□□□ -1.64
LINC00397-202ENST00000606785 GLCEO94923 617 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 TFAP2AP05549 437 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 HOXC6P09630 235 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 ANKRD34CP0C6C1 535 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 IRF2P14316 349 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 ZNF23P17027 643 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 ITGA2P17301 1181 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 CKMT2P17540 419 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 IL10P22301 178 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 CBLP22681 906 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 SERPINB6P35237 376 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 AHRP35869 848 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 IER3P46695 156 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 RPL21P46778 160 aaKnown RBP4.8□□□□□ -1.64
LINC00397-202ENST00000606785 NPBWR1P48145 328 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 ARCN1P48444 511 aaKnown RBP4.8□□□□□ -1.64
LINC00397-202ENST00000606785 PCYT1AP49585 367 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 PLCD1P51178 756 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 PGGT1BP53609 377 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 MLLT10P55197 1068 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 CX3CL1P78423 397 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 SLC20A2Q08357 652 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 ILF2Q12905 390 aaKnown RBP4.8□□□□□ -1.64
LINC00397-202ENST00000606785 MYBPHQ13203 477 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 KLF9Q13886 244 aaPredicted RBP4.8□□□□□ -1.64
LINC00397-202ENST00000606785 TWIST1Q15672 202 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 HLFQ16534 295 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 DNAJC21Q5F1R6 531 aaKnown RBP4.8□□□□□ -1.64
LINC00397-202ENST00000606785 BTNL8Q6UX41 500 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 PLXDC2Q6UX71 529 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 PACS1Q6VY07 963 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 SLC9B2Q86UD5 537 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 EXOC3L1Q86VI1 746 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 AMIGO1Q86WK6 493 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 GPALPP1Q8IXQ4 340 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 APCDD1Q8J025 514 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 CLIP4Q8N3C7 705 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 FGFBP3Q8TAT2 258 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 P2RX5Q93086 422 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 CDCA5Q96FF9 252 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 THOC1Q96FV9 657 aaKnown RBP4.8□□□□□ -1.64
LINC00397-202ENST00000606785 SGK494Q96LW2 274 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 PANX3Q96QZ0 392 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 C1QTNF7Q9BXJ2 289 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 TM6SF1Q9BZW5 370 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 TRPC7Q9HCX4 862 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 GSN-AS1Q9NRJ2 163 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 DNAJC11Q9NVH1 559 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 EPS15L1Q9UBC2 864 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 GMEB2Q9UKD1 530 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 KCNS2Q9ULS6 477 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 MYO6Q9UM54 1294 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 WDR83OSQ9Y284 106 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 ITM2BQ9Y287 266 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 MTF2Q9Y483 593 aaPredicted RBP4.8□□□□□ -1.64
LINC00397-202ENST00000606785 JRKLQ9Y4A0 524 aa4.8□□□□□ -1.64
LINC00397-202ENST00000606785 IGLV5-37A0A075B6J1 123 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 A0A0G2JNG1 304 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 ILVBLA1L0T0 632 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 SYCE3A1L190 88 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 PPEF2O14830 753 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 PRPSAP2O60256 369 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 RPS6KA5O75582 802 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 RAD51DO75771 328 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 STAM2O75886 525 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 PMS2P2O95744 297 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 FAM200BP0CF97 657 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 HSPA8P11142 646 aaKnown RBP4.79□□□□□ -1.64
LINC00397-202ENST00000606785 ZNF81P51508 661 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 RPS18P62269 152 aaKnown RBP4.79□□□□□ -1.64
LINC00397-202ENST00000606785 NFATC4Q14934 902 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 KIR2DS5Q14953 304 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 UGT3A2Q3SY77 523 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 PRAMEF8Q5VWM4 474 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 SUSD4Q5VX71 490 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 AQP12AQ8IXF9 295 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 CRYBG2Q8N1P7 616 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 HDDC3Q8N4P3 179 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 SMRP1Q8NCR6 262 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 IRGQQ8WZA9 623 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 AP2M1Q96CW1 435 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 ZG16BQ96DA0 208 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 EEF2KMTQ96G04 330 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 ABHD8Q96I13 439 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 FAM71F1Q96KD3 344 aaPredicted RBP4.79□□□□□ -1.64
LINC00397-202ENST00000606785 ABCG8Q9H221 673 aa4.79□□□□□ -1.64
LINC00397-202ENST00000606785 C1orf21Q9H246 121 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms