RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 KRT83P78385 493 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 GCNT1Q02742 428 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 CCDC15Q0P6D6 951 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 CETN1Q12798 172 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 EIF2B5Q13144 721 aaKnown RBP5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 SRSF6Q13247 344 aaKnown RBP5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 C1orf61Q13536 156 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 OTUD1Q5VV17 481 aaPredicted RBP5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 KLHL10Q6JEL2 608 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 C22orf39Q6P5X5 142 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 INO80CQ6PI98 192 aaPredicted RBP5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 TMEM108Q6UXF1 575 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 KYAT3Q6YP21 454 aaKnown RBP5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 RBM44Q6ZP01 1051 aaKnown RBP5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 DPY19L3Q6ZPD9 716 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 FAM183BPQ6ZVS7 135 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 TFAP2DQ7Z6R9 452 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 PARGQ86W56 976 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 RBFAQ8N0V3 343 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 EXD3Q8N9H8 876 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 SLC25A43Q8WUT9 341 aaPredicted RBP5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 SMARCE1Q969G3 411 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 CCDC34Q96HJ3 373 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 PPP1R13BQ96KQ4 1090 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 CCDC114Q96M63 670 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 TIGD1Q96MW7 591 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 GSDMAQ96QA5 445 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 KLF6Q99612 283 aaPredicted RBP5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 TRIM5Q9C035 493 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 TCEAL2Q9H3H9 227 aaPredicted RBP5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 CXorf36Q9H7Y0 433 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 UNKLQ9H9P5 680 aaKnown RBP5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 USP29Q9HBJ7 922 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 PIGVQ9NUD9 493 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 MPP6Q9NZW5 540 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 ITM2BQ9Y287 266 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 DNAJC16Q9Y2G8 782 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 TTLL3Q9Y4R7 772 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 FADS3Q9Y5Q0 445 aa5.42□□□□□ -1.54
HNRNPC-233ENST00000557768 SPTA1P02549 2419 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 EME2A4GXA9 379 aaPredicted RBP5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 BECN2A8MW95 431 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 STX16-NPEPL1H3BU86 382 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 STX16O14662 325 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 FPGTO14772 594 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 CD3EAPO15446 510 aaKnown RBP5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 P4HA2O15460 535 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 HSF2BPO75031 334 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 ZNF821O75541 412 aaPredicted RBP5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 GCATO75600 419 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 TIPRLO75663 272 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 SMC2O95347 1197 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 PEX11BO96011 259 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 ERBB2P04626 1255 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 ITGALP20701 1170 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 OR1E1P30953 314 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 APOBEC3AP31941 199 aaPredicted RBP5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 GKP32189 559 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 RABIFP47224 123 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 CXCR3P49682 368 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 CCNHP51946 323 aaPredicted RBP5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 PGDP52209 483 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 PDX1P52945 283 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 STX17P56962 302 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 RNASE9P60153 205 aaKnown RBP5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 SGCGQ13326 291 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 STIM1Q13586 685 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 CSHL1Q14406 222 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 TGIF1Q15583 401 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 CCNG2Q16589 344 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 MEA1Q16626 185 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 TSTQ16762 297 aaKnown RBP5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 P3H1Q32P28 736 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 LINC00303Q3SY05 128 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 GALNTL6Q49A17 601 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 C5orf22Q49AR2 442 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 EFHC1Q5JVL4 640 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 KIAA1161Q6NSJ0 714 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 TTI2Q6NXR4 508 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 DRICH1Q6PGQ1 229 aaPredicted RBP5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 OLFML1Q6UWY5 402 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 RINLQ6ZS11 566 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 C11orf57Q6ZUT1 292 aaPredicted RBP5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 PARS2Q7L3T8 475 aaKnown RBP5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 SLC35F3Q8IY50 421 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 ZNF683Q8IZ20 524 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 ARL14Q8N4G2 192 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 DCAF4L2Q8NA75 395 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 OR6K2Q8NGY2 324 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 WDR36Q8NI36 951 aaKnown RBP5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 SPATA20Q8TB22 786 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 POC1BQ8TC44 478 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 TMEM171Q8WVE6 324 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 NELFBQ8WX92 580 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 RNF125Q96EQ8 232 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 DHTKD1Q96HY7 919 aaPredicted RBP5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 PPP1R16AQ96I34 528 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 RSRC1Q96IZ7 334 aaKnown RBP5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 FEM1CQ96JP0 617 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms