RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 CYP2A7P20853 494 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 PTPN4P29074 926 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 ATP5DP30049 168 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 PEBP1P30086 187 aaKnown RBP9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CLCN7P51798 805 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 DHX9Q08211 1270 aaKnown RBP9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CDC20Q12834 499 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 ERV3-1Q14264 604 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 GBX1Q14549 363 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 MORF4L2Q15014 288 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 SF1Q15637 639 aaKnown RBP9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 ZIC1Q15915 447 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 DEFB109BQ30KR1 87 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 TTLL9Q3SXZ7 439 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 BBS9Q3SYG4 887 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 HSP90AA5PQ58FG0 334 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 ACSBG2Q5FVE4 666 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 SPANXN3Q5MJ09 141 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 PRAMEF17Q5VTA0 474 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 ZNF549Q6P9A3 640 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 FAM199XQ6PEV8 388 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 ZNF517Q6ZMY9 492 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 NEK10Q6ZWH5 1172 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 KCNMB4Q86W47 210 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 GPR135Q8IZ08 494 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 DSELQ8IZU8 1212 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 PDIK1LQ8N165 341 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 DNAJC22Q8N4W6 341 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 LINC01555Q8NAE3 123 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 SLC38A9Q8NBW4 561 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 ZUFSPQ96AP4 578 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 FAM136AQ96C01 138 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 IL17FQ96PD4 163 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 FAM117AQ9C073 453 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 SLC7A5P2Q9GIP4 190 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 SPRTNQ9H040 489 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 ADNPQ9H2P0 1102 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 ACTR5Q9H9F9 607 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 L2HGDHQ9H9P8 463 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 IARS2Q9NSE4 1012 aaKnown RBP9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 INTS7Q9NVH2 962 aaKnown RBP9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 GEMIN8Q9NWZ8 242 aaKnown RBP9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CIDEBQ9UHD4 219 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 DHRS7Q9Y394 339 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 AP1M2Q9Y6Q5 423 aa9.38□□□□□ -0.91
TNFRSF1A-214ENST00000543048 TARM1B6A8C7 271 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 TTI1O43156 1089 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 ZNF749O43361 778 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 PRICKLE3O43900 615 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 OR2B3O76000 313 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 RAB40ALP0C0E4 278 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 FAM87AP0C7U9 286 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 ERVK-10P10266 1014 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 OAS2P29728 719 aaKnown RBP9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 SLC1A2P43004 574 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 BDKRB1P46663 353 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 GABRA4P48169 554 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 GPS2Q13227 327 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CRYMQ14894 314 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CYP2A13Q16696 494 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 KLHL38Q2WGJ6 581 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CCSMST1Q4G0I0 132 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 HIBCHQ6NVY1 386 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 TLDC1Q6P9B6 456 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CNSTQ6PJW8 725 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 FIGLAQ6QHK4 219 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 ZNF605Q86T29 641 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 MCATQ8IVS2 390 aaKnown RBP9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 IGDCC3Q8IVU1 814 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 LMNTD1Q8N9Z9 388 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 C2CD4AQ8NCU7 369 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 OR9A1PQ8NGU1 263 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 HMGCLL1Q8TB92 370 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 APOBEC4Q8WW27 367 aaKnown RBP9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 SEC14L1Q92503 715 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 DPH2Q9BQC3 489 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 FAM167BQ9BTA0 163 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CHST8Q9H2A9 424 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 FAM114A2Q9NRY5 505 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CDC23Q9UJX2 597 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 PLCL2Q9UPR0 1127 aa9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 HELZ2Q9BYK8 2649 aaKnown RBP9.37□□□□□ -0.91
TNFRSF1A-214ENST00000543048 SPTA1P02549 2419 aa9.36□□□□□ -0.91
TNFRSF1A-214ENST00000543048 SCN3AQ9NY46 2000 aa9.36□□□□□ -0.91
TNFRSF1A-214ENST00000543048 BSNQ9UPA5 3926 aa9.36□□□□□ -0.91
TNFRSF1A-214ENST00000543048 ZNF462Q96JM2 2506 aa9.36□□□□□ -0.91
TNFRSF1A-214ENST00000543048 DOCK10Q96BY6 2186 aa9.36□□□□□ -0.91
TNFRSF1A-214ENST00000543048 TNRC6AQ8NDV7 1962 aaKnown RBP9.36□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CDC14CA4D256 554 aa9.36□□□□□ -0.91
TNFRSF1A-214ENST00000543048 B8ZZF3 427 aa9.36□□□□□ -0.91
TNFRSF1A-214ENST00000543048 H3BMH7 237 aa9.36□□□□□ -0.91
TNFRSF1A-214ENST00000543048 NDC80O14777 642 aa9.36□□□□□ -0.91
TNFRSF1A-214ENST00000543048 HCRTR1O43613 425 aa9.36□□□□□ -0.91
TNFRSF1A-214ENST00000543048 VPS26AO75436 327 aa9.36□□□□□ -0.91
TNFRSF1A-214ENST00000543048 PSIP1O75475 530 aaKnown RBP9.36□□□□□ -0.91
TNFRSF1A-214ENST00000543048 BANF1O75531 89 aa9.36□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CATP04040 527 aaKnown RBP9.36□□□□□ -0.91
TNFRSF1A-214ENST00000543048 F7P08709 466 aaPredicted RBP9.36□□□□□ -0.91
TNFRSF1A-214ENST00000543048 MPC1LP0DKB6 136 aa9.36□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CBSLP0DN79 551 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms