RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 PRUNE2Q8WUY3 3088 aa14.4□□□□□ -0.1
DDX55-209ENST00000542286 KRBA1A5PL33 1030 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 ANTXRLA6NF34 631 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 ZBBXA8MT70 800 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 WDR47O94967 919 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 LDLRP01130 860 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 PGRP06401 933 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 BCKDHAP12694 445 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 RPS3P23396 243 aaKnown RBP eCLIP14.39□□□□□ -0.11
DDX55-209ENST00000542286 ETV3P41162 512 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 EEFSECP57772 596 aaKnown RBP14.39□□□□□ -0.11
DDX55-209ENST00000542286 FOXM1Q08050 763 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 NFATC3Q12968 1075 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 PGS1Q32NB8 556 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 PTCHD3Q3KNS1 767 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 MPPE1Q53F39 396 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 COQ5Q5HYK3 327 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 KCTD8Q6ZWB6 473 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 ANKRD33Q7Z3H0 272 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 DDX53Q86TM3 631 aaKnown RBP14.39□□□□□ -0.11
DDX55-209ENST00000542286 STK32CQ86UX6 486 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 TERB1Q8NA31 727 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 TMBIM1Q969X1 311 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 SCRN2Q96FV2 425 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 APIPQ96GX9 242 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 ITCHQ96J02 903 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 OR52E6Q96RD3 313 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 TBX21Q9UL17 535 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.39□□□□□ -0.11
DDX55-209ENST00000542286 TRIM64A6NGJ6 449 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 H0Y858 1186 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 RASAL1O95294 804 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 CXCL14O95715 111 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 GPIP06744 558 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 MAP4P27816 1152 aaKnown RBP14.39□□□□□ -0.11
DDX55-209ENST00000542286 RPS9P46781 194 aaKnown RBP14.39□□□□□ -0.11
DDX55-209ENST00000542286 METAP1P53582 386 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 ERVFC1P60507 584 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 PWP1Q13610 501 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 TEAD2Q15562 447 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 NEDD8Q15843 81 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 SLC36A3Q495N2 470 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 MACC1Q6ZN28 852 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 HTR3DQ70Z44 454 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 HSD11B1LQ7Z5J1 315 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 CLEC4FQ8N1N0 589 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 OR2T12Q8NG77 320 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 SELENOMQ8WWX9 145 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 ING5Q8WYH8 240 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 STARD8Q92502 1023 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 NCLNQ969V3 563 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 HTATIP2Q9BUP3 242 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 RETREG1Q9H6L5 497 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 ZDHHC4Q9NPG8 344 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 GPRC5BQ9NZH0 403 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 ITM2BQ9Y287 266 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 RBMX2Q9Y388 322 aaKnown RBP14.39□□□□□ -0.11
DDX55-209ENST00000542286 MYO15AQ9UKN7 3530 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 TRIM64BA6NI03 449 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 TTC34A8MYJ7 566 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 UPK1AO00322 258 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 NOL3O60936 208 aaKnown RBP14.39□□□□□ -0.11
DDX55-209ENST00000542286 GNPDA1P46926 289 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 PIGFQ07326 219 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 MESP2Q0VG99 397 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 INTS11Q5TA45 600 aaKnown RBP14.39□□□□□ -0.11
DDX55-209ENST00000542286 DEPDC1Q5TB30 811 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 THOC7Q6I9Y2 204 aaKnown RBP14.39□□□□□ -0.11
DDX55-209ENST00000542286 TPRG1Q6ZUI0 275 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 SPRED1Q7Z699 444 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 PNPT1Q8TCS8 783 aaKnown RBP14.39□□□□□ -0.11
DDX55-209ENST00000542286 APOLD1Q96LR9 279 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 C9orf16Q9BUW7 83 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 OGDHLQ9ULD0 1010 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 WNT6Q9Y6F9 365 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 PLXNB3Q9ULL4 1909 aa14.39□□□□□ -0.11
DDX55-209ENST00000542286 TRAV19A0A0A6YYK7 116 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 AQP9O43315 295 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 RGS14O43566 566 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 KCNH1O95259 989 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 CCNA2P20248 432 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 JAK1P23458 1154 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 HTR1EP28566 365 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 NSG1P42857 185 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 PREPP48147 710 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 SNRPD1P62314 119 aaKnown RBP14.38□□□□□ -0.11
DDX55-209ENST00000542286 ABRQ12979 859 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 SULT1C3Q6IMI6 304 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 IGFN1Q86VF2 1251 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 FAM217AQ8IXS0 508 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 DPP10Q8N608 796 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 MFSD2AQ8NA29 543 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 KREMEN2Q8NCW0 462 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 CEP295NLQ96MC4 621 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 MUS81Q96NY9 551 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 AASSQ9UDR5 926 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 ADGRE2Q9UHX3 823 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 PPT2Q9UMR5 302 aa14.38□□□□□ -0.11
DDX55-209ENST00000542286 EIF3LQ9Y262 564 aaKnown RBP14.38□□□□□ -0.11
DDX55-209ENST00000542286 PCDHB14Q9Y5E9 798 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms