RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 E5RI56 91 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 PCDHGA12O60330 932 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 GUCY1B2O75343 617 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 SEMG1P04279 462 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 FABP3P05413 133 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 HOXB9P17482 250 aaPredicted RBP17.17■□□□□ 0.34
RAB40C-205ENST00000539661 HTR3AP46098 478 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 RPP38P78345 283 aaKnown RBP17.17■□□□□ 0.34
RAB40C-205ENST00000539661 NPRL3Q12980 569 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 HORMAD1Q86X24 394 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 P3H2Q8IVL5 708 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 UBQLNLQ8IYU4 475 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 SLC10A4Q96EP9 437 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 DHRS1Q96LJ7 313 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 CEP44Q9C0F1 390 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 NUAK2Q9H093 628 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 TNKS2Q9H2K2 1166 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 MARCH7Q9H992 704 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 LRTM1Q9HBL6 345 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 MIOSQ9NXC5 875 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 FBXL12Q9NXK8 326 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 EHD3Q9NZN3 535 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 PSORS1C1Q9UIG5 152 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 RPS6KA6Q9UK32 745 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 WBP11Q9Y2W2 641 aaKnown RBP17.17■□□□□ 0.34
RAB40C-205ENST00000539661 MYO16Q9Y6X6 1858 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 ESR1P03372 595 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 OR2B6P58173 313 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 CREMQ03060 361 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 SPANXN2Q5MJ10 180 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 ATAD3CQ5T2N8 411 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 ENTHD1Q8IYW4 607 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 SIMC1Q8NDZ2 872 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 OR7G1Q8NGA0 311 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 GTF3C2Q8WUA4 911 aaPredicted RBP17.16■□□□□ 0.34
RAB40C-205ENST00000539661 RASSF5Q8WWW0 418 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 DNASE1L2Q92874 299 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 HRASLS5Q96KN8 279 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 CDK5RAP1Q96SZ6 601 aaKnown RBP17.16■□□□□ 0.34
RAB40C-205ENST00000539661 SERHLQ9NQF3 203 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 RASSF1Q9NS23 344 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 SLC6A13Q9NSD5 602 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 PCDHGA3Q9Y5H0 932 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 DPM1O60762 260 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 ZNF682O95780 498 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 LIMK1P53667 647 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 MFSD10Q14728 455 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 LAPTM4AQ15012 233 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 USP39Q53GS9 565 aaKnown RBP17.16■□□□□ 0.34
RAB40C-205ENST00000539661 TOR1AIP1Q5JTV8 583 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 KRTCAP2Q8N6L1 136 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 PAF1Q8N7H5 531 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 CELF2-AS1Q8N7Q2 184 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 OR10T2Q8NGX3 314 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 SETD6Q8TBK2 473 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.16■□□□□ 0.342e-6■■■□□ 15.6
RAB40C-205ENST00000539661 ARIH1Q9Y4X5 557 aaPredicted RBP17.16■□□□□ 0.34
RAB40C-205ENST00000539661 LYVE1Q9Y5Y7 322 aa17.16■□□□□ 0.34
RAB40C-205ENST00000539661 CASTOR2A6NHX0 329 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 PDHXO00330 501 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 TREHO43280 583 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 PARNO95453 639 aaKnown RBP17.15■□□□□ 0.34
RAB40C-205ENST00000539661 GLUD1P00367 558 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 PCSK2P16519 638 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 MAPKAPK2P49137 400 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 TSPY1Q01534 308 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 PRSS36Q5K4E3 855 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 FBXL22Q6P050 247 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 SERPINA11Q86U17 422 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 MON1AQ86VX9 555 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 SPATA2LQ8IUW3 424 aaPredicted RBP17.15■□□□□ 0.34
RAB40C-205ENST00000539661 THEM5Q8N1Q8 247 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 C10orf111Q8N326 155 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 ATG16L2Q8NAA4 619 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 GPRC5AQ8NFJ5 357 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 IGSF8Q969P0 613 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 RAD9AQ99638 391 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 GABARAPL3Q9BY60 117 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 ABHD16BQ9H3Z7 469 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 FAM105AQ9NUU6 356 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 FKBP14Q9NWM8 211 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 TBC1D14Q9P2M4 693 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 ZMYM5Q9UJ78 669 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 GOLGA8CPA6NN73 597 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 FFAR2O15552 330 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 OR1I1O60431 355 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 ULK1O75385 1050 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 ARHGEF15O94989 841 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 CDK1P06493 297 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 MYCLP1P12525 358 aaPredicted RBP17.15■□□□□ 0.34
RAB40C-205ENST00000539661 LPOP22079 712 aaPredicted RBP17.15■□□□□ 0.34
RAB40C-205ENST00000539661 PTGER3P43115 390 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 CDKN1CP49918 316 aaPredicted RBP17.15■□□□□ 0.34
RAB40C-205ENST00000539661 AFF1P51825 1210 aaKnown RBP17.15■□□□□ 0.34
RAB40C-205ENST00000539661 UGT2B15P54855 530 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 CHRNEQ04844 493 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 CDK10Q15131 360 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 PSAPL1Q6NUJ1 521 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 SUSD1Q6UWL2 747 aa17.15■□□□□ 0.34
RAB40C-205ENST00000539661 SBSNQ6UWP8 590 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms