RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 MAGEC3Q8TD91 643 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 UBLCP1Q8WVY7 318 aaPredicted RBP17.56■□□□□ 0.4
VEGFA-222ENST00000520948 ISL2Q96A47 359 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 LINGO1Q96FE5 620 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 SLC12A9Q9BXP2 914 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 SRMSQ9H3Y6 488 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 XKR8Q9H6D3 395 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 GPAMQ9HCL2 828 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 TMEM9Q9P0T7 183 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 TSR3Q9UJK0 312 aaKnown RBP17.56■□□□□ 0.4
VEGFA-222ENST00000520948 ADAMTS6Q9UKP5 1117 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 IKZF3Q9UKT9 509 aa17.56■□□□□ 0.4
VEGFA-222ENST00000520948 TDRKHQ9Y2W6 561 aaKnown RBP17.56■□□□□ 0.4
VEGFA-222ENST00000520948 OR6C74A6NCV1 312 aa17.55■□□□□ 0.4
VEGFA-222ENST00000520948 SLC16A5O15375 505 aa17.55■□□□□ 0.4
VEGFA-222ENST00000520948 PHGDHO43175 533 aaKnown RBP17.55■□□□□ 0.4
VEGFA-222ENST00000520948 SHBGP04278 402 aa17.55■□□□□ 0.4
VEGFA-222ENST00000520948 C8GP07360 202 aa17.55■□□□□ 0.4
VEGFA-222ENST00000520948 PKLRP30613 574 aa17.55■□□□□ 0.4
VEGFA-222ENST00000520948 SHMT2P34897 504 aa17.55■□□□□ 0.4
VEGFA-222ENST00000520948 MAGEA12P43365 314 aa17.55■□□□□ 0.4
VEGFA-222ENST00000520948 SLC12A2P55011 1212 aa17.55■□□□□ 0.4
VEGFA-222ENST00000520948 BMPR2Q13873 1038 aa17.55■□□□□ 0.4
VEGFA-222ENST00000520948 MROH9Q5TGP6 573 aa17.55■□□□□ 0.4
VEGFA-222ENST00000520948 TTC23LQ6PF05 361 aa17.55■□□□□ 0.4
VEGFA-222ENST00000520948 KLHL35Q6PF15 583 aa17.55■□□□□ 0.4
VEGFA-222ENST00000520948 ARHGAP22Q7Z5H3 698 aa17.55■□□□□ 0.4
VEGFA-222ENST00000520948 CMC1Q7Z7K0 106 aa17.55■□□□□ 0.4
VEGFA-222ENST00000520948 PLXDC1Q8IUK5 500 aa17.55■□□□□ 0.4
VEGFA-222ENST00000520948 MYO1HQ8N1T3 1032 aa17.55■□□□□ 0.4
VEGFA-222ENST00000520948 MREGQ8N565 214 aa17.55■□□□□ 0.4
VEGFA-222ENST00000520948 DENND1AQ8TEH3 1009 aa17.55■□□□□ 0.4
VEGFA-222ENST00000520948 HRASLS2Q9NWW9 162 aa17.55■□□□□ 0.4
VEGFA-222ENST00000520948 SEMA5BQ9P283 1151 aa17.55■□□□□ 0.4
VEGFA-222ENST00000520948 PLAGL1Q9UM63 463 aa17.55■□□□□ 0.4
VEGFA-222ENST00000520948 PCDHB11Q9Y5F2 797 aa17.55■□□□□ 0.4
VEGFA-222ENST00000520948 MYO1CO00159 1063 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 RASGRF2O14827 1237 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 ZBTB14O43829 449 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 KDM1AO60341 852 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 CATP04040 527 aaKnown RBP17.54■□□□□ 0.4
VEGFA-222ENST00000520948 ALDOAP04075 364 aaKnown RBP17.54■□□□□ 0.4
VEGFA-222ENST00000520948 ITGB2P05107 769 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 SLC35E2BP0CK96 405 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 ERGP11308 486 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 CCL4P13236 92 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 CNTFP26441 200 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 CRABP2P29373 138 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 GFERP55789 205 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 SP140Q13342 867 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 UBE2R2Q712K3 238 aaPredicted RBP17.54■□□□□ 0.4
VEGFA-222ENST00000520948 LINC01555Q8NAE3 123 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 RCBTB1Q8NDN9 531 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 OR9A1PQ8NGU1 263 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 OR2L8Q8NGY9 312 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 FLVCR1-AS1Q8TAF5 88 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 HMGCLL1Q8TB92 370 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 PKP4Q99569 1192 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 DERL2Q9GZP9 239 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 OR6C2Q9NZP2 312 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 PDE10AQ9Y233 779 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 SDK2Q58EX2 2172 aa17.54■□□□□ 0.4
VEGFA-222ENST00000520948 BOD1L1Q8NFC6 3051 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 KRT87PA6NCN2 255 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 BTN3A1O00481 513 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 TOX3O15405 576 aaPredicted RBP17.53■□□□□ 0.4
VEGFA-222ENST00000520948 CAPN5O15484 640 aaPredicted RBP17.53■□□□□ 0.4
VEGFA-222ENST00000520948 PRICKLE3O43900 615 aaPredicted RBP17.53■□□□□ 0.4
VEGFA-222ENST00000520948 KRT38O76015 456 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 C2P06681 752 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 NUDT17P0C025 328 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 CCDC166P0CW27 439 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 THRAP10827 490 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 POLR2CP19387 275 aaPredicted RBP17.53■□□□□ 0.4
VEGFA-222ENST00000520948 SLC26A3P40879 764 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 RAB28P51157 221 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 PPP1CAP62136 330 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 TRA2AQ13595 282 aaKnown RBP eCLIP17.53■□□□□ 0.42e-8■□□□□ 9.9
VEGFA-222ENST00000520948 TBR1Q16650 682 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 CYP2A13Q16696 494 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 TIFABQ6ZNK6 161 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 OOSP2Q86WS3 158 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 DTX1Q86Y01 620 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 ZSCAN1Q8NBB4 408 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 PMEPA1Q969W9 287 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 IL17FQ96PD4 163 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 CCDC77Q9BR77 488 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 PARVBQ9HBI1 364 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 SNX15Q9NRS6 342 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 STARD5Q9NSY2 213 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 EURLQ9NYK6 297 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 SPATA7Q9P0W8 599 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 CIDEBQ9UHD4 219 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 NOVA2Q9UNW9 492 aaKnown RBP17.53■□□□□ 0.4
VEGFA-222ENST00000520948 IKBKGQ9Y6K9 419 aa17.53■□□□□ 0.4
VEGFA-222ENST00000520948 CTIFO43310 598 aaKnown RBP17.52■□□□□ 0.4
VEGFA-222ENST00000520948 CHRM5P08912 532 aaPredicted RBP17.52■□□□□ 0.4
VEGFA-222ENST00000520948 SNRPAP09012 282 aaKnown RBP17.52■□□□□ 0.4
VEGFA-222ENST00000520948 ANKRD34CP0C6C1 535 aa17.52■□□□□ 0.4
VEGFA-222ENST00000520948 MPSTP25325 297 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms