RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 TCEAL2Q9H3H9 227 aaPredicted RBP12.36□□□□□ -0.43
TRAF4-208ENST00000469529 UCK1Q9HA47 277 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 SLC40A1Q9NP59 571 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 SEMA4BQ9NPR2 832 aaPredicted RBP12.36□□□□□ -0.43
TRAF4-208ENST00000469529 PFDN4Q9NQP4 134 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 DNAJC28Q9NX36 388 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 OR6C2Q9NZP2 312 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 APOBEC3BQ9UH17 382 aaKnown RBP12.36□□□□□ -0.43
TRAF4-208ENST00000469529 TSR3Q9UJK0 312 aaKnown RBP12.36□□□□□ -0.43
TRAF4-208ENST00000469529 SLC22A14Q9Y267 594 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 TSC22D4Q9Y3Q8 395 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 KCNE2Q9Y6J6 123 aa12.36□□□□□ -0.43
TRAF4-208ENST00000469529 FAM221BA6H8Z2 402 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 GIPC1O14908 333 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 PRICKLE3O43900 615 aaPredicted RBP12.35□□□□□ -0.43
TRAF4-208ENST00000469529 CCNT2O60583 730 aaKnown RBP12.35□□□□□ -0.43
TRAF4-208ENST00000469529 WDR47O94967 919 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 FKBP9O95302 570 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 EML2O95834 649 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 CCR10P46092 362 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 ARFIP2P53365 341 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 ERVPABLB-1P60509 514 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 BNC1Q01954 994 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 DUOXA1Q1HG43 343 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 ZNF423Q2M1K9 1284 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 PRRT3Q5FWE3 981 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 SLC30A9Q6PML9 568 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 MBOAT1Q6ZNC8 495 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 GPRIN3Q6ZVF9 776 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 MILR1Q7Z6M3 343 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 SYVN1Q86TM6 617 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 CACNA2D3Q8IZS8 1091 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 OR4K3Q96R72 315 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 HAUS8Q9BT25 410 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 CCDC28BQ9BUN5 200 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 SLC29A3Q9BZD2 475 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 PITHD1Q9GZP4 211 aaPredicted RBP12.35□□□□□ -0.43
TRAF4-208ENST00000469529 ATG10Q9H0Y0 220 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 MID1IP1Q9NPA3 183 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 TMEM74BQ9NUR3 256 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 POT1Q9NUX5 634 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 TRPS1Q9UHF7 1281 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 ANGPTL3Q9Y5C1 460 aa12.35□□□□□ -0.43
TRAF4-208ENST00000469529 VPS13AQ96RL7 3174 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 OR52A4PA6NMU1 304 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 NPIPB8E9PQR5 432 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 HGSO14964 777 aaPredicted RBP12.34□□□□□ -0.43
TRAF4-208ENST00000469529 YY2O15391 372 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 YKT6O15498 198 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 AQP9O43315 295 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 CLDN9O95484 217 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 PCSK2P16519 638 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 GNAZP19086 355 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 HRH2P25021 359 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 MPSTP25325 297 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 PKLRP30613 574 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 SHMT2P34897 504 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 HNF4AP41235 474 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 FASLGP48023 281 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 IDH3AP50213 366 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 CCNG1P51959 295 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 AQP5P55064 265 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 IRX1P78414 480 aaPredicted RBP12.34□□□□□ -0.43
TRAF4-208ENST00000469529 SRSF5Q13243 272 aaKnown RBP12.34□□□□□ -0.43
TRAF4-208ENST00000469529 KRT33BQ14525 404 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 KIF19Q2TAC6 998 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 SH2D4BQ5SQS7 431 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 IL27RAQ6UWB1 636 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 RPS27LQ71UM5 84 aaKnown RBP12.34□□□□□ -0.43
TRAF4-208ENST00000469529 MAVSQ7Z434 540 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 SYTL1Q8IYJ3 562 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 NAGSQ8N159 534 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 FAM46DQ8NEK8 389 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 ABHD11Q8NFV4 315 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 OR52B6Q8NGF0 335 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 OR52E1Q8NGJ3 308 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 RFWD2Q8NHY2 731 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 ACTRT2Q8TDY3 377 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 ELF4Q99607 663 aaPredicted RBP12.34□□□□□ -0.43
TRAF4-208ENST00000469529 FAM107BQ9H098 131 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 MEAF6Q9HAF1 191 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 CAPN10Q9HC96 672 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 TNFRSF12AQ9NP84 129 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 NPHS2Q9NP85 383 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 CCDC177Q9NQR7 707 aaPredicted RBP12.34□□□□□ -0.43
TRAF4-208ENST00000469529 ACSS2Q9NR19 701 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 IMP3Q9NV31 184 aaKnown RBP12.34□□□□□ -0.43
TRAF4-208ENST00000469529 NCDNQ9UBB6 729 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 CPNE7Q9UBL6 633 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 PCDHGA5Q9Y5G8 931 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 DNAJC15Q9Y5T4 150 aa12.34□□□□□ -0.43
TRAF4-208ENST00000469529 KCNE1BA0A087WTH5 132 aa12.33□□□□□ -0.44
TRAF4-208ENST00000469529 A0A1B0GTL3 188 aa12.33□□□□□ -0.44
TRAF4-208ENST00000469529 A0A1B0GVT2 93 aa12.33□□□□□ -0.44
TRAF4-208ENST00000469529 A0A1W2PPV9 198 aa12.33□□□□□ -0.44
TRAF4-208ENST00000469529 H0YIV9 168 aa12.33□□□□□ -0.44
TRAF4-208ENST00000469529 SCAMP1O15126 338 aa12.33□□□□□ -0.44
TRAF4-208ENST00000469529 VPS4BO75351 444 aa12.33□□□□□ -0.44
TRAF4-208ENST00000469529 PIAS2O75928 621 aa12.33□□□□□ -0.44
TRAF4-208ENST00000469529 VIPP01282 170 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms