RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 FAM189BP81408 668 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 CREMQ03060 361 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 DSC3Q14574 896 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 CPSF6Q16630 551 aaKnown RBP eCLIP11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 RFX4Q33E94 735 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 SOWAHCQ53LP3 525 aaPredicted RBP11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 C6orf183Q5T699 404 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 ATAD3BQ5T9A4 648 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 ATG9BQ674R7 924 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 SNX20Q7Z614 316 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 RASAL3Q86YV0 1011 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 ARMC8Q8IUR7 673 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 PSD4Q8NDX1 1056 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 SETD9Q8NE22 299 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 APH1BQ8WW43 257 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 ZHX1-C8orf76Q96EF9 292 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 DCSTAMPQ9H295 470 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 SCN3BQ9NY72 215 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 OPTCQ9UBM4 332 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 CAB39Q9Y376 341 aaPredicted RBP11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 OR2A25A4D2G3 310 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 H3BNC9 293 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 MANBAO00462 879 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 SCAMP3O14828 347 aaKnown RBP11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 PCDHGA12O60330 932 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 HOXB9P17482 250 aaPredicted RBP11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 NR4A2P43354 598 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 PPP5CP53041 499 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 TWF1Q12792 350 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 STEAP3Q658P3 488 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 PTRHD1Q6GMV3 140 aaKnown RBP11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 OR2T5Q6IEZ7 315 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 SERINC5Q86VE9 423 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 RNF175Q8N4F7 328 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 OR2T29Q8NH02 315 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 DNASE1L2Q92874 299 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 AMBNQ9NP70 447 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 TLR8Q9NR97 1041 aaKnown RBP11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 SLC45A1Q9Y2W3 748 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 ZNF451Q9Y4E5 1061 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 PCDHB5Q9Y5E4 795 aa11.44□□□□□ -0.58
PDZRN3-203ENST00000462146 A0A096LPI6 279 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 KRT87PA6NCN2 255 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 PSMD11O00231 422 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 NBNO60934 754 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 RECQL5O94762 991 aaPredicted RBP11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 GLUD1P00367 558 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 PDYNP01213 254 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 CD9P21926 228 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 PSMA3P25788 255 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 C21orf33P30042 268 aaPredicted RBP11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 SERPINB1P30740 379 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 GRK5P34947 590 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 RPS14P62263 151 aaKnown RBP11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 KEAP1Q14145 624 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 DEPDC1Q5TB30 811 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 CLIP4Q8N3C7 705 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 GLB1L3Q8NCI6 653 aaPredicted RBP11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 TRIB2Q92519 343 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 PARK7Q99497 189 aaKnown RBP11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 SH3GL1Q99961 368 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 DPH2Q9BQC3 489 aaPredicted RBP11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 BCL7BQ9BQE9 202 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 CD244Q9BZW8 370 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 C6orf62Q9GZU0 229 aaPredicted RBP11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 MAGEH1Q9H213 219 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 SCN8AQ9UQD0 1980 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 GLTPD2A6NH11 291 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 A6NL46 340 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 SLC28A1O00337 649 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 KDELR3O43731 214 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 UPK1BO75841 260 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 OAZ2O95190 189 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 SLC25A14O95258 325 aaPredicted RBP11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 DLGAP3O95886 979 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 VIPP01282 170 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 ZNF24P17028 368 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 EFNA1P20827 205 aaPredicted RBP11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 TCEA1P23193 301 aaKnown RBP11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 LRIF1Q5T3J3 769 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 OR4F3Q6IEY1 312 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 SERPINA9Q86WD7 417 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 DENND1CQ8IV53 801 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 OR6K2Q8NGY2 324 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 PROX1Q92786 737 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 UROC1Q96N76 676 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 GABARAPL1Q9H0R8 117 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 EHD1Q9H4M9 534 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 IL37Q9NZH6 218 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 NDRG4Q9ULP0 352 aaKnown RBP11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 OARD1Q9Y530 152 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 PCDHB9Q9Y5E1 797 aa11.43□□□□□ -0.58
PDZRN3-203ENST00000462146 GOLGA8CPA6NN73 597 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 PGLSO95336 258 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 GJB5O95377 273 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 CD160O95971 181 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 DBTP11182 482 aaKnown RBP11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 S100A3P33764 101 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 GRK3P35626 688 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 ARF5P84085 180 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 385.1 ms