RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 SLC44A4Q53GD3 710 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 TCEAL5Q5H9L2 206 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 NHSL2Q5HYW2 709 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 LIPJQ5W064 366 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 FRG2Q64ET8 278 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 ATG9BQ674R7 924 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 TMEM220Q6QAJ8 160 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 LIPIQ6XZB0 460 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 MSANTD1Q6ZTZ1 278 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 PARS2Q7L3T8 475 aaKnown RBP10.15□□□□□ -0.78
CPNE1-218ENST00000439806 THOC6Q86W42 341 aaKnown RBP10.15□□□□□ -0.78
CPNE1-218ENST00000439806 DTWD1Q8N5C7 304 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 DHRSXQ8N5I4 330 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 TRIML2Q8N7C3 387 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 ZNF366Q8N895 744 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 RASGEF1AQ8N9B8 481 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 ZNF784Q8NCA9 323 aaPredicted RBP10.15□□□□□ -0.78
CPNE1-218ENST00000439806 TSPAN14Q8NG11 270 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 OR10A6Q8NH74 314 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 PHOSPHO2Q8TCD6 241 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 BPIFB1Q8TDL5 484 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 CSGALNACT1Q8TDX6 532 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 CYGBQ8WWM9 190 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 SMG7Q92540 1137 aaKnown RBP10.15□□□□□ -0.78
CPNE1-218ENST00000439806 NCLNQ969V3 563 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 FAM120BQ96EK7 910 aaKnown RBP10.15□□□□□ -0.78
CPNE1-218ENST00000439806 APOLD1Q96LR9 279 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 CCDC115Q96NT0 180 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 TSSK3Q96PN8 268 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 FRG2BQ96QU4 278 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 CHID1Q9BWS9 393 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 ZCCHC2Q9C0B9 1178 aaKnown RBP10.15□□□□□ -0.78
CPNE1-218ENST00000439806 VCX3AQ9NNX9 186 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 LIMD1Q9UGP4 676 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 MBD1Q9UIS9 605 aaPredicted RBP10.15□□□□□ -0.78
CPNE1-218ENST00000439806 FBXO10Q9UK96 956 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 DLGAP4Q9Y2H0 992 aa10.15□□□□□ -0.78
CPNE1-218ENST00000439806 DENND4AQ7Z401 1863 aa10.15□□□□□ -0.79
CPNE1-218ENST00000439806 SRCAPQ6ZRS2 3230 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 LINC01553A4QN01 128 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 NPIPB8E9PQR5 432 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 PLOD2O00469 737 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 CXCR6O00574 342 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 PER2O15055 1255 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 CLOCKO15516 846 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 H6PDO95479 791 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 NFATC1O95644 943 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 MT-ND1P03886 318 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 POU2F2P09086 479 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 ACPPP15309 386 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 AMD1P17707 334 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 SDC1P18827 310 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 MYF6P23409 242 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 RPS9P46781 194 aaKnown RBP10.14□□□□□ -0.79
CPNE1-218ENST00000439806 CTSCP53634 463 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 PFN3P60673 137 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 ELP6Q0PNE2 266 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 MERTKQ12866 999 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 TMEM115Q12893 351 aaPredicted RBP10.14□□□□□ -0.79
CPNE1-218ENST00000439806 NAE1Q13564 534 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 GTDC1Q4AE62 458 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 NADK2Q4G0N4 442 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 XKR6Q5GH73 641 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 GRHL2Q6ISB3 625 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 TTC33Q6PID6 262 aaPredicted RBP10.14□□□□□ -0.79
CPNE1-218ENST00000439806 AGTRAPQ6RW13 159 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 FKBP9P1Q75LS8 142 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 GPR180Q86V85 440 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 SYT12Q8IV01 421 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 RASGRP3Q8IV61 690 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 RIMKLAQ8IXN7 391 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 FAM47BQ8NA70 645 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 ZNF548Q8NEK5 533 aaPredicted RBP10.14□□□□□ -0.79
CPNE1-218ENST00000439806 FBXO30Q8TB52 745 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 HM13Q8TCT9 377 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 OR8D1Q8WZ84 308 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 HERVK_113Q902F9 699 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 TFAP2CQ92754 450 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 TESCQ96BS2 214 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 SDCCAG3Q96C92 435 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 SLC47A1Q96FL8 570 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 MED8Q96G25 268 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 APIPQ96GX9 242 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 CCDC138Q96M89 665 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 ZNF583Q96ND8 569 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 CPPED1Q9BRF8 314 aaPredicted RBP10.14□□□□□ -0.79
CPNE1-218ENST00000439806 TBCDQ9BTW9 1192 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 WRAP53Q9BUR4 548 aaKnown RBP10.14□□□□□ -0.79
CPNE1-218ENST00000439806 PAIP1Q9H074 479 aaKnown RBP10.14□□□□□ -0.79
CPNE1-218ENST00000439806 MTIF3Q9H2K0 278 aaKnown RBP10.14□□□□□ -0.79
CPNE1-218ENST00000439806 CD320Q9NPF0 282 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 PAPOLBQ9NRJ5 636 aaKnown RBP10.14□□□□□ -0.79
CPNE1-218ENST00000439806 WBP1LQ9NX94 342 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 SMPD3Q9NY59 655 aaPredicted RBP10.14□□□□□ -0.79
CPNE1-218ENST00000439806 STOX2Q9P2F5 926 aaPredicted RBP10.14□□□□□ -0.79
CPNE1-218ENST00000439806 THEGQ9P2T0 379 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 ADGRE2Q9UHX3 823 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 INVSQ9Y283 1065 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 ITM2BQ9Y287 266 aa10.14□□□□□ -0.79
CPNE1-218ENST00000439806 MAN2B2Q9Y2E5 1009 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms