RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 STAM2O75886 525 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 LGALS2P05162 132 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 POLR2CP19387 275 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 SP100P23497 879 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 FASLGP48023 281 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 NT5C2P49902 561 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 KRTAP10-12P60413 245 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 GRIK2Q13002 908 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 GIT2Q14161 759 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 ALG11Q2TAA5 492 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 PRICKLE4Q2TBC4 344 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 CCNYL2Q5T2Q4 361 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 OR7E24Q6IFN5 339 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 STOX1Q6ZVD7 989 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 GPR180Q86V85 440 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 CCDC13Q8IYE1 715 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 THNSL1Q8IYQ7 743 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 OR10V1Q8NGI7 309 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 MRPS27Q92552 414 aaKnown RBP4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 RNF125Q96EQ8 232 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 ST6GAL2Q96JF0 529 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 RBM4Q9BWF3 364 aaKnown RBP4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 POMKQ9H5K3 350 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 KIF9Q9HAQ2 790 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 BRF2Q9HAW0 419 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 ECHDC1Q9NTX5 307 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 ACSS1Q9NUB1 689 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 PADI3Q9ULW8 664 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 TNNQ9UQP3 1299 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 KLHL20Q9Y2M5 609 aa4.57□□□□□ -1.68
HMGB3P5-201ENST00000428894 ASPMQ8IZT6 3477 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 PKD1L2Q7Z442 2459 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 FAM208BQ5VWN6 2430 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 CTAGE9A4FU28 777 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 HOXC11O43248 304 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 NMT2O60551 498 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 CTAGE8P0CG41 777 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 PCP11498 1178 aaKnown RBP4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 SCG2P13521 617 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 NR1D1P20393 614 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 CCND2P30279 289 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 NR0B1P51843 470 aaKnown RBP4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 MGAT3Q09327 533 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 PTP4A2Q12974 167 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 GAGE5Q13069 117 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 GAGE6Q13070 117 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 BIRC3Q13489 604 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 SMC1AQ14683 1233 aaKnown RBP4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 CDC37Q16543 378 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 TMEM30BQ3MIR4 351 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 DCST1Q5T197 706 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 PLPP4Q5VZY2 271 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 SLC35E4Q6ICL7 350 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 ARHGAP11AQ6P4F7 1023 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 SLC27A1Q6PCB7 646 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 METTL7BQ6UX53 244 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 CACNA2D4Q7Z3S7 1137 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 CTAGE4Q8IX94 777 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 MNS1Q8NEH6 495 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 ACVR1CQ8NER5 493 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 VN1R2Q8NFZ6 395 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 DNAJB3Q8WWF6 145 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 ITFG2Q969R8 447 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 ZNF524Q96C55 264 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 LINGO1Q96FE5 620 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 ZNF354BQ96LW1 612 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 EIF2AK1Q9BQI3 630 aaKnown RBP4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 PCGF1Q9BSM1 259 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 CCDC94Q9BW85 323 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 BARHL1Q9BZE3 327 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 LRRCC1Q9C099 1032 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 UPF2Q9HAU5 1272 aaKnown RBP4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 ASAH2Q9NR71 780 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 HAO1Q9UJM8 370 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 DUSP12Q9UNI6 340 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 R4GN57 208 aa4.56□□□□□ -1.68
HMGB3P5-201ENST00000428894 NOTCH3Q9UM47 2321 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 IGLV5-45A0A087WSX0 123 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 CCDC196A0A1B0GTZ2 297 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 RRN3P2A6NIE6 340 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 EPB41L2O43491 1005 aaKnown RBP4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 IGHV4-39P01824 125 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 TUBBP07437 444 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 CCDC172P0C7W6 258 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 SP9P0CG40 484 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 FAM106CPP0CH98 169 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 NEFHP12036 1026 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 UBA1P22314 1058 aaKnown RBP4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 CD52P31358 61 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 ARL1P40616 181 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 HSD17B4P51659 736 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 NAP1L1P55209 391 aaKnown RBP4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 TUBB4BP68371 445 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 MRPS6P82932 125 aaKnown RBP4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 DECR1Q16698 335 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 ZNF528Q3MIS6 628 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 C18orf63Q68DL7 685 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 CEACAM20Q6UY09 585 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 RAD9BQ6WBX8 426 aa4.55□□□□□ -1.68
HMGB3P5-201ENST00000428894 SLC24A5Q71RS6 500 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms