RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 ISXQ2M1V0 245 aa29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 TRIM73Q86UV7 250 aa29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 LRRC56Q8IYG6 542 aaPredicted RBP29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 DCBLD1Q8N8Z6 715 aa29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 HMGCLL1Q8TB92 370 aa29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 STAG3L4Q8TBR4 150 aa29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 ACMSDQ8TDX5 336 aa29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 OR2A14Q96R47 310 aa29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 ATOH8Q96SQ7 321 aa29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 MAP3K3Q99759 626 aa29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 PDP2Q9P2J9 529 aa29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 POMT2Q9UKY4 750 aa29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 HYAL3O43820 417 aaPredicted RBP29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 THRAP10827 490 aa29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 COL6A2P12110 1019 aa29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 LSSP48449 732 aa29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 INHBCP55103 352 aa29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 TARDBPQ13148 414 aaKnown RBP eCLIP29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 ARHGAP19Q14CB8 494 aa29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 AGTRAPQ6RW13 159 aa29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 LRIG3Q6UXM1 1119 aa29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 TMPRSS12Q86WS5 348 aa29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 EGFL8Q99944 293 aa29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 DPYSL5Q9BPU6 564 aa29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 ENTPD2Q9Y5L3 495 aa29.56■■■□□ 2.32
CSNK1E-206ENST00000413574 RASSF9O75901 435 aa29.55■■■□□ 2.32
CSNK1E-206ENST00000413574 C18orf21Q32NC0 220 aaPredicted RBP29.55■■■□□ 2.32
CSNK1E-206ENST00000413574 KLC3Q6P597 504 aa29.55■■■□□ 2.32
CSNK1E-206ENST00000413574 TRABD2AQ86V40 505 aa29.55■■■□□ 2.32
CSNK1E-206ENST00000413574 C4orf33Q8N1A6 199 aa29.55■■■□□ 2.32
CSNK1E-206ENST00000413574 DEPDC7Q96QD5 511 aa29.55■■■□□ 2.32
CSNK1E-206ENST00000413574 PRICKLE3O43900 615 aaPredicted RBP29.54■■■□□ 2.32
CSNK1E-206ENST00000413574 KERAO60938 352 aa29.54■■■□□ 2.32
CSNK1E-206ENST00000413574 KRT4P19013 534 aa29.54■■■□□ 2.32
CSNK1E-206ENST00000413574 HSD17B2P37059 387 aa29.54■■■□□ 2.32
CSNK1E-206ENST00000413574 YBX1P67809 324 aaKnown RBP29.54■■■□□ 2.32
CSNK1E-206ENST00000413574 KIR2DS3Q14952 304 aa29.54■■■□□ 2.32
CSNK1E-206ENST00000413574 FBXO48Q5FWF7 155 aa29.54■■■□□ 2.32
CSNK1E-206ENST00000413574 TECRLQ5HYJ1 363 aa29.54■■■□□ 2.32
CSNK1E-206ENST00000413574 SPESP1Q6UW49 350 aa29.54■■■□□ 2.32
CSNK1E-206ENST00000413574 TMPRSS7Q7RTY8 843 aa29.54■■■□□ 2.32
CSNK1E-206ENST00000413574 CNPY4Q8N129 248 aa29.54■■■□□ 2.32
CSNK1E-206ENST00000413574 SMPDL3AQ92484 453 aa29.54■■■□□ 2.32
CSNK1E-206ENST00000413574 ALKBH8Q96BT7 664 aaKnown RBP29.54■■■□□ 2.32
CSNK1E-206ENST00000413574 FBXL8Q96CD0 374 aa29.54■■■□□ 2.32
CSNK1E-206ENST00000413574 SCYL1Q96KG9 808 aa29.54■■■□□ 2.32
CSNK1E-206ENST00000413574 TMEM74Q96NL1 305 aa29.54■■■□□ 2.32
CSNK1E-206ENST00000413574 ACAT2Q9BWD1 397 aa29.54■■■□□ 2.32
CSNK1E-206ENST00000413574 KLHL25Q9H0H3 589 aa29.54■■■□□ 2.32
CSNK1E-206ENST00000413574 CENPHQ9H3R5 247 aa29.54■■■□□ 2.32
CSNK1E-206ENST00000413574 KNTC1P50748 2209 aa29.54■■■□□ 2.32
CSNK1E-206ENST00000413574 IGHV5-51A0A0C4DH38 117 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 UBXN8O00124 270 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 MATN2O00339 956 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 NAE1Q13564 534 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 TSNAXIP1Q2TAA8 658 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 CACHD1Q5VU97 1274 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 C16orf46Q6P387 395 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 RHEBL1Q8TAI7 183 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 PYCR2Q96C36 320 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 MED8Q96G25 268 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 TSNARE1Q96NA8 513 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 CD274Q9NZQ7 290 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 TMEM216Q9P0N5 145 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 SUPT3HB4E1H0 165 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 SUPT3HO75486 399 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 ANXA5P08758 320 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 PVRP15151 417 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 SEPHS1P49903 392 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 CDKL1Q00532 357 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 CDHR3Q6ZTQ4 885 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 SRRM1Q8IYB3 904 aaKnown RBP29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 GALNT15Q8N3T1 639 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 RHBDF1Q96CC6 855 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 XPR1Q9UBH6 696 aa29.53■■■□□ 2.32
CSNK1E-206ENST00000413574 RGS16O15492 202 aaPredicted RBP29.52■■■□□ 2.32
CSNK1E-206ENST00000413574 SPINK2P20155 84 aa29.52■■■□□ 2.32
CSNK1E-206ENST00000413574 CDH3P22223 829 aa29.52■■■□□ 2.32
CSNK1E-206ENST00000413574 OAS2P29728 719 aaKnown RBP29.52■■■□□ 2.32
CSNK1E-206ENST00000413574 CCKBRP32239 447 aa29.52■■■□□ 2.32
CSNK1E-206ENST00000413574 TBPL1P62380 186 aa29.52■■■□□ 2.32
CSNK1E-206ENST00000413574 C16orf72Q14CZ0 275 aa29.52■■■□□ 2.32
CSNK1E-206ENST00000413574 SF1Q15637 639 aaKnown RBP29.52■■■□□ 2.32
CSNK1E-206ENST00000413574 ARHGAP22Q7Z5H3 698 aa29.52■■■□□ 2.32
CSNK1E-206ENST00000413574 OR2A1Q8NGT9 310 aa29.52■■■□□ 2.32
CSNK1E-206ENST00000413574 CPSF2Q9P2I0 782 aaKnown RBP29.52■■■□□ 2.32
CSNK1E-206ENST00000413574 KLHL20Q9Y2M5 609 aa29.52■■■□□ 2.32
CSNK1E-206ENST00000413574 ADAMTS20P59510 1910 aa29.51■■■□□ 2.32
CSNK1E-206ENST00000413574 TLCD2A6NGC4 264 aa29.51■■■□□ 2.31
CSNK1E-206ENST00000413574 ZNF839A8K0R7 811 aa29.51■■■□□ 2.31
CSNK1E-206ENST00000413574 TK2O00142 265 aa29.51■■■□□ 2.31
CSNK1E-206ENST00000413574 MTHFD2P13995 350 aa29.51■■■□□ 2.31
CSNK1E-206ENST00000413574 ESAMQ96AP7 390 aa29.51■■■□□ 2.31
CSNK1E-206ENST00000413574 MIPEPQ99797 713 aa29.51■■■□□ 2.31
CSNK1E-206ENST00000413574 TAC3Q9UHF0 121 aa29.51■■■□□ 2.31
CSNK1E-206ENST00000413574 TAPBPO15533 448 aa29.5■■■□□ 2.31
CSNK1E-206ENST00000413574 PRAMEF10O60809 474 aa29.5■■■□□ 2.31
CSNK1E-206ENST00000413574 RPA3P35244 121 aaPredicted RBP29.5■■■□□ 2.31
CSNK1E-206ENST00000413574 TMEM151AQ8N4L1 468 aa29.5■■■□□ 2.31
CSNK1E-206ENST00000413574 ATL1Q8WXF7 558 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms