RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 CPNE6O95741 557 aa16.33■□□□□ 0.2
SIPA1-201ENST00000394224 OTCP00480 354 aa16.33■□□□□ 0.2
SIPA1-201ENST00000394224 PDYNP01213 254 aa16.33■□□□□ 0.2
SIPA1-201ENST00000394224 ZNF865P0CJ78 1059 aaPredicted RBP16.33■□□□□ 0.2
SIPA1-201ENST00000394224 KRT20P35900 424 aa16.33■□□□□ 0.2
SIPA1-201ENST00000394224 IER5LQ5T953 404 aa16.33■□□□□ 0.2
SIPA1-201ENST00000394224 PTRH1Q86Y79 214 aaKnown RBP16.33■□□□□ 0.2
SIPA1-201ENST00000394224 EID2BQ96D98 161 aa16.33■□□□□ 0.2
SIPA1-201ENST00000394224 TTPALQ9BTX7 342 aa16.33■□□□□ 0.2
SIPA1-201ENST00000394224 SLC22A14Q9Y267 594 aa16.33■□□□□ 0.2
SIPA1-201ENST00000394224 ARIH1Q9Y4X5 557 aaPredicted RBP16.33■□□□□ 0.2
SIPA1-201ENST00000394224 H0YAE9 185 aa16.33■□□□□ 0.2
SIPA1-201ENST00000394224 VPS4BO75351 444 aa16.33■□□□□ 0.2
SIPA1-201ENST00000394224 WDR47O94967 919 aa16.33■□□□□ 0.2
SIPA1-201ENST00000394224 TTPAP49638 278 aa16.33■□□□□ 0.2
SIPA1-201ENST00000394224 CLK3P49761 638 aaKnown RBP16.33■□□□□ 0.2
SIPA1-201ENST00000394224 XKR7Q5GH72 579 aa16.33■□□□□ 0.2
SIPA1-201ENST00000394224 CD300LGQ6UXG3 332 aa16.33■□□□□ 0.2
SIPA1-201ENST00000394224 IL4I1Q96RQ9 567 aa16.33■□□□□ 0.2
SIPA1-201ENST00000394224 ARHGAP39Q9C0H5 1083 aa16.33■□□□□ 0.2
SIPA1-201ENST00000394224 PALMDQ9NP74 551 aa16.33■□□□□ 0.2
SIPA1-201ENST00000394224 SIRT5Q9NXA8 310 aa16.33■□□□□ 0.2
SIPA1-201ENST00000394224 ZIM2Q9NZV7 527 aa16.33■□□□□ 0.2
SIPA1-201ENST00000394224 SNX6Q9UNH7 406 aa16.33■□□□□ 0.2
SIPA1-201ENST00000394224 STSP08842 583 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 EPB42P16452 691 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 MSH3P20585 1137 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 PPP2R2BQ00005 443 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 DESI1Q6ICB0 168 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 SLC16A10Q8TF71 515 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 TMEM203Q969S6 136 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 MS4A4AQ96JQ5 239 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 CEP19Q96LK0 163 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 TRIM39Q9HCM9 518 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 CTPS2Q9NRF8 586 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 AASDHPPTQ9NRN7 309 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 MBD1Q9UIS9 605 aaPredicted RBP16.32■□□□□ 0.2
SIPA1-201ENST00000394224 EVPLLA8MZ36 301 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 AREL1O15033 823 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 ADAM12O43184 909 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 TULP3O75386 442 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 ENGP17813 658 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 WEE1P30291 646 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 CORO1AP31146 461 aaKnown RBP16.32■□□□□ 0.2
SIPA1-201ENST00000394224 PPP3CCP48454 512 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 ZNF140P52738 457 aaPredicted RBP16.32■□□□□ 0.2
SIPA1-201ENST00000394224 RPP38P78345 283 aaKnown RBP16.32■□□□□ 0.2
SIPA1-201ENST00000394224 OXA1LQ15070 435 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 RBM48Q5RL73 367 aaKnown RBP16.32■□□□□ 0.2
SIPA1-201ENST00000394224 LRRC66Q68CR7 880 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 TMEM173Q86WV6 379 aaPredicted RBP16.32■□□□□ 0.2
SIPA1-201ENST00000394224 NELL1Q92832 810 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 RHBDF1Q96CC6 855 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 COPS4Q9BT78 406 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 NLE1Q9NVX2 485 aaPredicted RBP16.32■□□□□ 0.2
SIPA1-201ENST00000394224 FAM32AQ9Y421 112 aaKnown RBP16.32■□□□□ 0.2
SIPA1-201ENST00000394224 SMAD6O43541 496 aaKnown RBP16.32■□□□□ 0.2
SIPA1-201ENST00000394224 HOXD9P28356 352 aaPredicted RBP16.32■□□□□ 0.2
SIPA1-201ENST00000394224 CRATP43155 626 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 SELENBP1Q13228 472 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 SLC14A2Q15849 920 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 STEAP3Q658P3 488 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 TAS1R1Q7RTX1 841 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 DTX3Q8N9I9 347 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 DOK1Q99704 481 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 OLA1Q9NTK5 396 aaKnown RBP16.32■□□□□ 0.2
SIPA1-201ENST00000394224 C1orf109Q9NX04 203 aa16.32■□□□□ 0.2
SIPA1-201ENST00000394224 TMEFF2Q9UIK5 374 aaPredicted RBP16.32■□□□□ 0.2
SIPA1-201ENST00000394224 RBM47A0AV96 593 aaKnown RBP16.31■□□□□ 0.2
SIPA1-201ENST00000394224 TAPBPO15533 448 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 RPL9P32969 192 aaKnown RBP16.31■□□□□ 0.2
SIPA1-201ENST00000394224 USP39Q53GS9 565 aaKnown RBP16.31■□□□□ 0.2
SIPA1-201ENST00000394224 ATAD3BQ5T9A4 648 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 PLEKHG7Q6ZR37 379 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 MEX3DQ86XN8 651 aaKnown RBP16.31■□□□□ 0.2
SIPA1-201ENST00000394224 TERB1Q8NA31 727 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 OR4K1Q8NGD4 311 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 VANGL1Q8TAA9 524 aaPredicted RBP16.31■□□□□ 0.2
SIPA1-201ENST00000394224 MUL1Q969V5 352 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 SH3KBP1Q96B97 665 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 DSN1Q9H410 356 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 ACSL6Q9UKU0 697 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 OR2AG2A6NM03 316 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 H3BM21 787 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 PFDN6O15212 129 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 COX7A2P14406 83 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 ELNP15502 786 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 SDHBP21912 280 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 GRK3P35626 688 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 MAP2K5Q13163 448 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 TMC5Q6UXY8 1006 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.31■□□□□ 0.2
SIPA1-201ENST00000394224 SYT12Q8IV01 421 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 ATL1Q8WXF7 558 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 DNASE1L2Q92874 299 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 HSH2DQ96JZ2 352 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 TYW5A2RUC4 315 aaKnown RBP16.31■□□□□ 0.2
SIPA1-201ENST00000394224 SYNDIG1LA6NDD5 238 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 CTDSP2O14595 271 aa16.31■□□□□ 0.2
SIPA1-201ENST00000394224 PCDHGA12O60330 932 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 165.6 ms