RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 SCN3BQ9NY72 215 aa17.51■□□□□ 0.39
PHF1-201ENST00000374512 STOML2Q9UJZ1 356 aa17.51■□□□□ 0.39
PHF1-201ENST00000374512 BACE2Q9Y5Z0 518 aa17.51■□□□□ 0.39
PHF1-201ENST00000374512 BRCA2P51587 3418 aa17.51■□□□□ 0.39
PHF1-201ENST00000374512 PTGES3LE9PB15 166 aa17.51■□□□□ 0.39
PHF1-201ENST00000374512 GPR39O43194 453 aa17.51■□□□□ 0.39
PHF1-201ENST00000374512 ATP6V1G1O75348 118 aa17.51■□□□□ 0.39
PHF1-201ENST00000374512 INMTO95050 263 aa17.51■□□□□ 0.39
PHF1-201ENST00000374512 GDF5P43026 501 aa17.51■□□□□ 0.39
PHF1-201ENST00000374512 MVKQ03426 396 aa17.51■□□□□ 0.39
PHF1-201ENST00000374512 OXA1LQ15070 435 aa17.51■□□□□ 0.39
PHF1-201ENST00000374512 TRIM16LQ309B1 348 aa17.51■□□□□ 0.39
PHF1-201ENST00000374512 GGTA1PQ4G0N0 100 aa17.51■□□□□ 0.39
PHF1-201ENST00000374512 CAPN13Q6MZZ7 669 aaPredicted RBP17.51■□□□□ 0.39
PHF1-201ENST00000374512 NEURL2Q9BR09 285 aa17.51■□□□□ 0.39
PHF1-201ENST00000374512 KLF16Q9BXK1 252 aaPredicted RBP17.51■□□□□ 0.39
PHF1-201ENST00000374512 RNF38Q9H0F5 515 aa17.51■□□□□ 0.39
PHF1-201ENST00000374512 GPBP1L1Q9HC44 474 aaPredicted RBP17.51■□□□□ 0.39
PHF1-201ENST00000374512 TM9SF3Q9HD45 589 aa17.51■□□□□ 0.39
PHF1-201ENST00000374512 CCNB1IP1Q9NPC3 277 aa17.51■□□□□ 0.39
PHF1-201ENST00000374512 AKIP1Q9NQ31 210 aa17.51■□□□□ 0.39
PHF1-201ENST00000374512 PAK1IP1Q9NWT1 392 aaPredicted RBP17.51■□□□□ 0.39
PHF1-201ENST00000374512 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.5■□□□□ 0.39
PHF1-201ENST00000374512 H0Y626 953 aa17.5■□□□□ 0.39
PHF1-201ENST00000374512 EIF3FO00303 357 aaPredicted RBP17.5■□□□□ 0.39
PHF1-201ENST00000374512 TRIM16O95361 564 aa17.5■□□□□ 0.39
PHF1-201ENST00000374512 PRAMEF12O95522 483 aa17.5■□□□□ 0.39
PHF1-201ENST00000374512 LATS1O95835 1130 aa17.5■□□□□ 0.39
PHF1-201ENST00000374512 ANXA5P08758 320 aa17.5■□□□□ 0.39
PHF1-201ENST00000374512 GRK3P35626 688 aa17.5■□□□□ 0.39
PHF1-201ENST00000374512 GGT5P36269 586 aa17.5■□□□□ 0.39
PHF1-201ENST00000374512 PTPN5P54829 565 aa17.5■□□□□ 0.39
PHF1-201ENST00000374512 IL5RAQ01344 420 aa17.5■□□□□ 0.39
PHF1-201ENST00000374512 ABRQ12979 859 aa17.5■□□□□ 0.39
PHF1-201ENST00000374512 DNAJC14Q6Y2X3 702 aaPredicted RBP17.5■□□□□ 0.39
PHF1-201ENST00000374512 SERPINA11Q86U17 422 aa17.5■□□□□ 0.39
PHF1-201ENST00000374512 ZDHHC21Q8IVQ6 265 aa17.5■□□□□ 0.39
PHF1-201ENST00000374512 PHACTR4Q8IZ21 702 aa17.5■□□□□ 0.39
PHF1-201ENST00000374512 CBARPQ8N350 705 aaPredicted RBP17.5■□□□□ 0.39
PHF1-201ENST00000374512 CCDC90BQ9GZT6 254 aa17.5■□□□□ 0.39
PHF1-201ENST00000374512 SLC32A1Q9H598 525 aa17.5■□□□□ 0.39
PHF1-201ENST00000374512 LTB4R2Q9NPC1 389 aa17.5■□□□□ 0.39
PHF1-201ENST00000374512 AFF4Q9UHB7 1163 aaKnown RBP17.5■□□□□ 0.39
PHF1-201ENST00000374512 TSR3Q9UJK0 312 aaKnown RBP17.5■□□□□ 0.39
PHF1-201ENST00000374512 INTS6Q9UL03 887 aaKnown RBP17.5■□□□□ 0.39
PHF1-201ENST00000374512 ZNF106Q9H2Y7 1883 aaKnown RBP17.5■□□□□ 0.39
PHF1-201ENST00000374512 AREL1O15033 823 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 PRKACGP22612 351 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 PTPN6P29350 595 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 MAPK8P45983 427 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 DGUOKQ16854 277 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 CES5AQ6NT32 575 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 TCAIMQ8N3R3 496 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 SVOPQ8N4V2 548 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 BEND7Q8N7W2 519 aaPredicted RBP17.49■□□□□ 0.39
PHF1-201ENST00000374512 LKAAEAR1Q8TD35 194 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 APOL4Q9BPW4 351 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 BOCQ9BWV1 1114 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 IL1RAPQ9NPH3 570 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 IL26Q9NPH9 171 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 FBXO8Q9NRD0 319 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 ATAD3AQ9NVI7 634 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 EVLQ9UI08 416 aaPredicted RBP17.49■□□□□ 0.39
PHF1-201ENST00000374512 SNX6Q9UNH7 406 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 CPQQ9Y646 472 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 PLXNA4Q9HCM2 1894 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 SEC24AO95486 1093 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 ALOX5P09917 674 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 CTPS1P17812 591 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 PFKLP17858 780 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 IDUAP35475 653 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 ALDH7A1P49419 539 aaKnown RBP17.49■□□□□ 0.39
PHF1-201ENST00000374512 PHC1P78364 1004 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 SLC35A2P78381 396 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 RAPSNQ13702 412 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 TAF12Q16514 161 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 TCTN1Q2MV58 587 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 GTDC1Q4AE62 458 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 SGO1Q5FBB7 561 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 SYT6Q5T7P8 510 aaPredicted RBP17.49■□□□□ 0.39
PHF1-201ENST00000374512 OR2T5Q6IEZ7 315 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 OR2T29Q8NH02 315 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 MCOLN3Q8TDD5 553 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 WBP2Q969T9 261 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 MAGEB10Q96LZ2 347 aaPredicted RBP17.49■□□□□ 0.39
PHF1-201ENST00000374512 HHIPQ96QV1 700 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 ACPTQ9BZG2 426 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 KCTD5Q9NXV2 234 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 DNMT3BQ9UBC3 853 aaKnown RBP17.49■□□□□ 0.39
PHF1-201ENST00000374512 PRSS21Q9Y6M0 314 aa17.49■□□□□ 0.39
PHF1-201ENST00000374512 MICAL3Q7RTP6 2002 aa17.48■□□□□ 0.39
PHF1-201ENST00000374512 A0A0U1RQS6 177 aa17.48■□□□□ 0.39
PHF1-201ENST00000374512 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.48■□□□□ 0.39
PHF1-201ENST00000374512 SERTM1A2A2V5 107 aa17.48■□□□□ 0.39
PHF1-201ENST00000374512 C2orf78A6NCI8 922 aa17.48■□□□□ 0.39
PHF1-201ENST00000374512 TMEM221A6NGB7 291 aa17.48■□□□□ 0.39
PHF1-201ENST00000374512 EVPLLA8MZ36 301 aa17.48■□□□□ 0.39
PHF1-201ENST00000374512 M0R3G1 203 aa17.48■□□□□ 0.39
PHF1-201ENST00000374512 TRBC1P01850 177 aa17.48■□□□□ 0.39
PHF1-201ENST00000374512 ALPIP09923 528 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms