RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 ENO1P06733 434 aaKnown RBP14.28□□□□□ -0.12
CXCL12-201ENST00000343575 AK4P27144 223 aaPredicted RBP14.28□□□□□ -0.12
CXCL12-201ENST00000343575 PRDX3P30048 256 aaKnown RBP14.28□□□□□ -0.12
CXCL12-201ENST00000343575 CLCNKAP51800 687 aa14.28□□□□□ -0.12
CXCL12-201ENST00000343575 CTBSQ01459 385 aa14.28□□□□□ -0.12
CXCL12-201ENST00000343575 CLCQ05315 142 aa14.28□□□□□ -0.12
CXCL12-201ENST00000343575 CLCA4Q14CN2 919 aa14.28□□□□□ -0.12
CXCL12-201ENST00000343575 ANKS6Q68DC2 871 aa14.28□□□□□ -0.12
CXCL12-201ENST00000343575 RD3Q7Z3Z2 195 aa14.28□□□□□ -0.12
CXCL12-201ENST00000343575 NRROSQ86YC3 692 aa14.28□□□□□ -0.12
CXCL12-201ENST00000343575 AGR3Q8TD06 166 aa14.28□□□□□ -0.12
CXCL12-201ENST00000343575 MIPOL1Q8TD10 442 aa14.28□□□□□ -0.12
CXCL12-201ENST00000343575 SPACA7Q96KW9 195 aa14.28□□□□□ -0.12
CXCL12-201ENST00000343575 PKP4Q99569 1192 aa14.28□□□□□ -0.12
CXCL12-201ENST00000343575 NRTNQ99748 197 aa14.28□□□□□ -0.12
CXCL12-201ENST00000343575 EGFL8Q99944 293 aa14.28□□□□□ -0.12
CXCL12-201ENST00000343575 CD244Q9BZW8 370 aa14.28□□□□□ -0.12
CXCL12-201ENST00000343575 DUSP15Q9H1R2 295 aaPredicted RBP14.28□□□□□ -0.12
CXCL12-201ENST00000343575 SEMA4BQ9NPR2 832 aaPredicted RBP14.28□□□□□ -0.12
CXCL12-201ENST00000343575 SCHIP1Q9P0W5 487 aaPredicted RBP14.28□□□□□ -0.12
CXCL12-201ENST00000343575 CFAP20Q9Y6A4 193 aaKnown RBP14.28□□□□□ -0.12
CXCL12-201ENST00000343575 DGKBQ9Y6T7 804 aa14.28□□□□□ -0.12
CXCL12-201ENST00000343575 CCNT2O60583 730 aaKnown RBP14.27□□□□□ -0.12
CXCL12-201ENST00000343575 GPR37L1O60883 481 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 SLC16A8O95907 504 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 ANXA5P08758 320 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 UQCRBP14927 111 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 EPORP19235 508 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 CYP2A7P20853 494 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 SLC6A12P48065 614 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 AP1S2P56377 157 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 SRSF5Q13243 272 aaKnown RBP14.27□□□□□ -0.12
CXCL12-201ENST00000343575 TCEA2Q15560 299 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 SLC36A4Q6YBV0 504 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 RAB44Q7Z6P3 723 aaPredicted RBP14.27□□□□□ -0.12
CXCL12-201ENST00000343575 DHDDSQ86SQ9 333 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 CUZD1Q86UP6 607 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 C1orf210Q8IVY1 113 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 LMNTD1Q8N9Z9 388 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 OR5AR1Q8NGP9 310 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 MAPK15Q8TD08 544 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 TRPC4APQ8TEL6 797 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 DNASE2BQ8WZ79 361 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 TFGQ92734 400 aaPredicted RBP14.27□□□□□ -0.12
CXCL12-201ENST00000343575 INSM2Q96T92 566 aaPredicted RBP14.27□□□□□ -0.12
CXCL12-201ENST00000343575 TRMOQ9BU70 441 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 CCDC106Q9BWC9 280 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 KLHL4Q9C0H6 718 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 ILKAPQ9H0C8 392 aaPredicted RBP14.27□□□□□ -0.12
CXCL12-201ENST00000343575 OSGEPL1Q9H4B0 414 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 PRDM8Q9NQV8 689 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 AASDHPPTQ9NRN7 309 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 SLC7A8Q9UHI5 535 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 ACSL5Q9ULC5 683 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 GMEB1Q9Y692 573 aa14.27□□□□□ -0.12
CXCL12-201ENST00000343575 THADAQ6YHU6 1953 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 KCNJ13O60928 360 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 BAG2O95816 211 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 CATP04040 527 aaKnown RBP14.27□□□□□ -0.13
CXCL12-201ENST00000343575 JUNP05412 331 aaKnown RBP14.27□□□□□ -0.13
CXCL12-201ENST00000343575 ALOX15P16050 662 aaPredicted RBP14.27□□□□□ -0.13
CXCL12-201ENST00000343575 IMPA1P29218 277 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 RACK1P63244 317 aaKnown RBP14.27□□□□□ -0.13
CXCL12-201ENST00000343575 PRKAA1Q13131 559 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 TBC1D25Q3MII6 688 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 UGT3A2Q3SY77 523 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 ZNF542PQ5EBM4 170 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 UNC5DQ6UXZ4 953 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 GOLGA7Q7Z5G4 137 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 WDR5BQ86VZ2 330 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 HID1Q8IV36 788 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 MFSD2AQ8NA29 543 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 OR52B6Q8NGF0 335 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 PPP4R1Q8TF05 950 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 PYCR2Q96C36 320 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 FBXL8Q96CD0 374 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 KLHDC7BQ96G42 594 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 THTPAQ9BU02 230 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 MENTQ9BUN1 341 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 TM9SF3Q9HD45 589 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 IRAK4Q9NWZ3 460 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 TBC1D29Q9UFV1 150 aa14.27□□□□□ -0.13
CXCL12-201ENST00000343575 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.27□□□□□ -0.13
CXCL12-201ENST00000343575 ARHGEF17Q96PE2 2063 aaPredicted RBP14.26□□□□□ -0.13
CXCL12-201ENST00000343575 A6NCN8 305 aa14.26□□□□□ -0.13
CXCL12-201ENST00000343575 MATN2O00339 956 aa14.26□□□□□ -0.13
CXCL12-201ENST00000343575 OR7A17O14581 309 aa14.26□□□□□ -0.13
CXCL12-201ENST00000343575 LAMTOR5O43504 91 aa14.26□□□□□ -0.13
CXCL12-201ENST00000343575 HIST1H2AGP0C0S8 130 aaPredicted RBP14.26□□□□□ -0.13
CXCL12-201ENST00000343575 ZCCHC18P0CG32 403 aa14.26□□□□□ -0.13
CXCL12-201ENST00000343575 HIST1H2ADP20671 130 aa14.26□□□□□ -0.13
CXCL12-201ENST00000343575 CD38P28907 300 aa14.26□□□□□ -0.13
CXCL12-201ENST00000343575 RPL14P50914 215 aaKnown RBP14.26□□□□□ -0.13
CXCL12-201ENST00000343575 FOXA1P55317 472 aa14.26□□□□□ -0.13
CXCL12-201ENST00000343575 LCP2Q13094 533 aa14.26□□□□□ -0.13
CXCL12-201ENST00000343575 PTCHD3Q3KNS1 767 aa14.26□□□□□ -0.13
CXCL12-201ENST00000343575 DUS1LQ6P1R4 473 aaKnown RBP14.26□□□□□ -0.13
CXCL12-201ENST00000343575 ALYREFQ86V81 257 aaKnown RBP14.26□□□□□ -0.13
CXCL12-201ENST00000343575 WDR75Q8IWA0 830 aaKnown RBP14.26□□□□□ -0.13
CXCL12-201ENST00000343575 HIST1H2AHQ96KK5 128 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms