RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 IL4I1Q96RQ9 567 aa16.08■□□□□ 0.17
PTCH1-201ENST00000331920 HINT2Q9BX68 163 aa16.08■□□□□ 0.17
PTCH1-201ENST00000331920 A0A0G2JMP0 313 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 H0YJX3 145 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 FESP07332 822 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 TUBA4AP68366 448 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 CNTD1Q8N815 330 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 OR4M2Q8NGB6 313 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 PCDHB18PQ96TA0 734 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 DUS2Q9NX74 493 aaKnown RBP16.08■□□□□ 0.16
PTCH1-201ENST00000331920 TCRBV9S1A1TA0A576 114 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 ILVBLA1L0T0 632 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 STMND1H3BQB6 276 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 ASGR1P07306 291 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 CD36P16671 472 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 SLC6A4P31645 630 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 HCAR3P49019 387 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 IQCCQ4KMZ1 466 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 SLC39A4Q6P5W5 647 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 LPGAT1Q92604 370 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 RCOR3Q9P2K3 495 aaPredicted RBP16.08■□□□□ 0.16
PTCH1-201ENST00000331920 LAMP5Q9UJQ1 280 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 GMEB2Q9UKD1 530 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 TNS3Q68CZ2 1445 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 ADAMTS12P58397 1594 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 ZNF460Q14592 562 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 FAM156AQ8NDB6 213 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 C9J4A7 227 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 OR1D2P34982 312 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 ABHD13Q7L211 337 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 OR5AK3PQ8NH89 298 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 ACMSDQ8TDX5 336 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 SETD7Q8WTS6 366 aaKnown RBP16.08■□□□□ 0.16
PTCH1-201ENST00000331920 DCAKDQ8WVC6 231 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 MSANTD3Q96H12 275 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 ADAP2Q9NPF8 381 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 STK16O75716 305 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 PTPN6P29350 595 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 FASLGP48023 281 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 GNMTQ14749 295 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 VITQ6UXI7 678 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 TMEM156Q8N614 296 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 Q8N9G6 341 aaPredicted RBP16.08■□□□□ 0.16
PTCH1-201ENST00000331920 SIDT2Q8NBJ9 832 aaKnown RBP16.08■□□□□ 0.16
PTCH1-201ENST00000331920 OR4K17Q8NGC6 315 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 NIFKQ9BYG3 293 aaKnown RBP16.08■□□□□ 0.16
PTCH1-201ENST00000331920 AMBNQ9NP70 447 aa16.08■□□□□ 0.16
PTCH1-201ENST00000331920 GNSP15586 552 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 CD52P31358 61 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 RARRES1P49788 294 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 WNT3AP56704 352 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 ZNF773Q6PK81 442 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 ZNF517Q6ZMY9 492 aaPredicted RBP16.07■□□□□ 0.16
PTCH1-201ENST00000331920 HAO2Q9NYQ3 351 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 CALML5Q9NZT1 146 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 hCG_1807616A0A1W2PRN6 198 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 TMEM150CB9EJG8 249 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 FCRL2Q96LA5 508 aaPredicted RBP16.07■□□□□ 0.16
PTCH1-201ENST00000331920 FAM83DQ9H4H8 585 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 GLDCP23378 1020 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 PPM1JQ5JR12 505 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 TMEM220Q6QAJ8 160 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.07■□□□□ 0.16
PTCH1-201ENST00000331920 ARL5BQ96KC2 179 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 RANBP3Q9H6Z4 567 aaPredicted RBP16.07■□□□□ 0.16
PTCH1-201ENST00000331920 METTL7AQ9H8H3 244 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 ZNF175Q9Y473 711 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 TCAF2A6NFQ2 919 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 MPPED1O15442 326 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 SMIM10L2AP0DMW4 78 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 SMIM10L2BP0DMW5 78 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 MPIP34949 423 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 MARCH9Q86YJ5 346 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 DEFB119Q8N690 84 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 MRM3Q9HC36 420 aaKnown RBP16.07■□□□□ 0.16
PTCH1-201ENST00000331920 DEC1Q9P2X7 70 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 CIB4A0PJX0 185 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 GRXCR1A8MXD5 290 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 PKMP14618 531 aaKnown RBP16.07■□□□□ 0.16
PTCH1-201ENST00000331920 MAGEA8P43361 318 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 PCDHGB2Q9Y5G2 931 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 PDGFRLQ15198 375 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 PDE12Q6L8Q7 609 aaKnown RBP16.07■□□□□ 0.16
PTCH1-201ENST00000331920 PIGZQ86VD9 579 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 ARHGAP12Q8IWW6 846 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 CPT1BQ92523 772 aa16.07■□□□□ 0.16
PTCH1-201ENST00000331920 CPNE2Q96FN4 548 aaPredicted RBP16.07■□□□□ 0.16
PTCH1-201ENST00000331920 NUP153P49790 1475 aaKnown RBP16.06■□□□□ 0.16
PTCH1-201ENST00000331920 CXCR6O00574 342 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 ACOX3O15254 700 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 SCGB2A1O75556 95 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 AGXTP21549 392 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 TUBA3CQ13748 450 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 KBTBD4Q9NVX7 518 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 KIAA0556O60303 1618 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 ENTPD6O75354 484 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 ADAP00813 363 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 TNFSF9P41273 254 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 POLR2HP52434 150 aaKnown RBP16.06■□□□□ 0.16
PTCH1-201ENST00000331920 GCNT1Q02742 428 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms