RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 MYO1CO00159 1063 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 CDC7O00311 574 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 HGSO14964 777 aaPredicted RBP12.2□□□□□ -0.46
RETREG3-203ENST00000585894 WISP3O95389 354 aaPredicted RBP12.2□□□□□ -0.46
RETREG3-203ENST00000585894 ST6GAL1P15907 406 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 CDH3P22223 829 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 YBX1P67809 324 aaKnown RBP12.2□□□□□ -0.46
RETREG3-203ENST00000585894 POU4F1Q01851 419 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 TSTA3Q13630 321 aaPredicted RBP12.2□□□□□ -0.46
RETREG3-203ENST00000585894 COL9A2Q14055 689 aaPredicted RBP12.2□□□□□ -0.46
RETREG3-203ENST00000585894 SLC29A2Q14542 456 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 SPESP1Q6UW49 350 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 SUSD1Q6UWL2 747 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 TRMT10CQ7L0Y3 403 aaKnown RBP12.2□□□□□ -0.46
RETREG3-203ENST00000585894 BMPERQ8N8U9 685 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 OR2L8Q8NGY9 312 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 GRAMD1AQ96CP6 724 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 ZNF768Q9H5H4 540 aaKnown RBP12.2□□□□□ -0.46
RETREG3-203ENST00000585894 APMAPQ9HDC9 416 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 ASCL3Q9NQ33 180 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 UTP6Q9NYH9 597 aaKnown RBP12.2□□□□□ -0.46
RETREG3-203ENST00000585894 OR6C2Q9NZP2 312 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 PDE10AQ9Y233 779 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 SDK2Q58EX2 2172 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 EIF3FO00303 357 aaPredicted RBP12.2□□□□□ -0.46
RETREG3-203ENST00000585894 SLC16A8O95907 504 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 ANKRD34CP0C6C1 535 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 EBLN1P0CF75 366 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 STMN1P16949 149 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 MAP4P27816 1152 aaKnown RBP12.2□□□□□ -0.46
RETREG3-203ENST00000585894 GCAP28676 217 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 FOXM1Q08050 763 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 EIF3IQ13347 325 aaKnown RBP12.2□□□□□ -0.46
RETREG3-203ENST00000585894 ZKSCAN8Q15776 578 aaPredicted RBP12.2□□□□□ -0.46
RETREG3-203ENST00000585894 EIF1ADQ8N9N8 165 aaKnown RBP12.2□□□□□ -0.46
RETREG3-203ENST00000585894 ZNF480Q8WV37 535 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 DCAKDQ8WVC6 231 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 SLC44A1Q8WWI5 657 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 KLHL6Q8WZ60 621 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 USP7Q93009 1102 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 SLC46A1Q96NT5 459 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 CNTNAP3BQ96NU0 1288 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 CNTNAP3Q9BZ76 1288 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 TWSG1Q9GZX9 223 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 CCDC86Q9H6F5 360 aaKnown RBP12.2□□□□□ -0.46
RETREG3-203ENST00000585894 SIDT1Q9NXL6 827 aaKnown RBP12.2□□□□□ -0.46
RETREG3-203ENST00000585894 FOXJ2Q9P0K8 574 aa12.2□□□□□ -0.46
RETREG3-203ENST00000585894 AKAP7Q9P0M2 348 aaPredicted RBP12.2□□□□□ -0.46
RETREG3-203ENST00000585894 HEATR5BQ9P2D3 2071 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 AHCTF1Q8WYP5 2266 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 EXOC1LA0A1B0GW35 172 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 A0A1W2PPV9 198 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 C9orf172C9J069 976 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 ZBTB14O43829 449 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 KDM1AO60341 852 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 SHBGP04278 402 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 CAPNS1P04632 268 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 ABHD2P08910 425 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 SLC35E2BP0CK96 405 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 CCDC166P0CW27 439 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 FOLR1P15328 257 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 NELFEP18615 380 aaKnown RBP12.19□□□□□ -0.46
RETREG3-203ENST00000585894 RBMS1P29558 406 aaKnown RBP12.19□□□□□ -0.46
RETREG3-203ENST00000585894 RAB10P61026 200 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 IRF9Q00978 393 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 DLG1Q12959 904 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 ZIC1Q15915 447 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 ANKS6Q68DC2 871 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 LRRC8EQ6NSJ5 796 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 SBSNQ6UWP8 590 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 RAPH1Q70E73 1250 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 MAGEC3Q8TD91 643 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 UBLCP1Q8WVY7 318 aaPredicted RBP12.19□□□□□ -0.46
RETREG3-203ENST00000585894 TSPAN17Q96FV3 270 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 TRAPPC9Q96Q05 1148 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 CD180Q99467 661 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 ACAT2Q9BWD1 397 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 SLC12A9Q9BXP2 914 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 PARD6BQ9BYG5 372 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 PITPNM3Q9BZ71 974 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 POPDC3Q9HBV1 291 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 RRAGDQ9NQL2 400 aaPredicted RBP12.19□□□□□ -0.46
RETREG3-203ENST00000585894 SOHLH2Q9NX45 425 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 SLC39A1Q9NY26 324 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 PCDHGA8Q9Y5G5 932 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 ZZEF1O43149 2961 aa12.19□□□□□ -0.46
RETREG3-203ENST00000585894 USP24Q9UPU5 2620 aa12.18□□□□□ -0.46
RETREG3-203ENST00000585894 MATN2O00339 956 aa12.18□□□□□ -0.46
RETREG3-203ENST00000585894 TOX3O15405 576 aaPredicted RBP12.18□□□□□ -0.46
RETREG3-203ENST00000585894 TLX3O43711 291 aaPredicted RBP12.18□□□□□ -0.46
RETREG3-203ENST00000585894 NRP2O60462 931 aa12.18□□□□□ -0.46
RETREG3-203ENST00000585894 GUCA1CO95843 209 aa12.18□□□□□ -0.46
RETREG3-203ENST00000585894 ALDOAP04075 364 aaKnown RBP12.18□□□□□ -0.46
RETREG3-203ENST00000585894 C8GP07360 202 aa12.18□□□□□ -0.46
RETREG3-203ENST00000585894 INHBAP08476 426 aa12.18□□□□□ -0.46
RETREG3-203ENST00000585894 CYP2A7P20853 494 aa12.18□□□□□ -0.46
RETREG3-203ENST00000585894 IMPA1P29218 277 aa12.18□□□□□ -0.46
RETREG3-203ENST00000585894 ARL4DP49703 201 aa12.18□□□□□ -0.46
RETREG3-203ENST00000585894 PNLIPRP1P54315 467 aa12.18□□□□□ -0.46
RETREG3-203ENST00000585894 CSHL1Q14406 222 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms