RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 DEFB110Q30KQ9 67 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 LYPLAL1Q5VWZ2 237 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 ZNF385CQ66K41 422 aaPredicted RBP11.44□□□□□ -0.58
GABPB1-206ENST00000543881 AFTPHQ6ULP2 937 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 LDB1Q86U70 411 aaPredicted RBP11.44□□□□□ -0.58
GABPB1-206ENST00000543881 SYTL1Q8IYJ3 562 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 C19orf47Q8N9M1 422 aaKnown RBP11.44□□□□□ -0.58
GABPB1-206ENST00000543881 LMNTD1Q8N9Z9 388 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 OR4L1Q8NH43 312 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 OR5K2Q8NHB8 316 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 ILKAPQ9H0C8 392 aaPredicted RBP11.44□□□□□ -0.58
GABPB1-206ENST00000543881 MARCH4Q9P2E8 410 aaPredicted RBP11.44□□□□□ -0.58
GABPB1-206ENST00000543881 SERTAD3Q9UJW9 196 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 ENTPD4Q9Y227 616 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 TDRKHQ9Y2W6 561 aaKnown RBP11.44□□□□□ -0.58
GABPB1-206ENST00000543881 TCAF1Q9Y4C2 921 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 OTOGQ6ZRI0 2925 aa11.44□□□□□ -0.58
GABPB1-206ENST00000543881 MDC1Q14676 2089 aaKnown RBP11.43□□□□□ -0.58
GABPB1-206ENST00000543881 E7EQ34 232 aa11.43□□□□□ -0.58
GABPB1-206ENST00000543881 GAS8O95995 478 aa11.43□□□□□ -0.58
GABPB1-206ENST00000543881 APRTP07741 180 aa11.43□□□□□ -0.58
GABPB1-206ENST00000543881 CRADDP78560 199 aa11.43□□□□□ -0.58
GABPB1-206ENST00000543881 SYTL3Q4VX76 610 aa11.43□□□□□ -0.58
GABPB1-206ENST00000543881 CRB2Q5IJ48 1285 aa11.43□□□□□ -0.58
GABPB1-206ENST00000543881 FAM20CQ8IXL6 584 aa11.43□□□□□ -0.58
GABPB1-206ENST00000543881 OR6P1Q8NGX9 317 aa11.43□□□□□ -0.58
GABPB1-206ENST00000543881 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.43□□□□□ -0.58
GABPB1-206ENST00000543881 BARD1Q99728 777 aaKnown RBP11.43□□□□□ -0.58
GABPB1-206ENST00000543881 MENTQ9BUN1 341 aa11.43□□□□□ -0.58
GABPB1-206ENST00000543881 AP1M1Q9BXS5 423 aa11.43□□□□□ -0.58
GABPB1-206ENST00000543881 TSGA10Q9BZW7 698 aa11.43□□□□□ -0.58
GABPB1-206ENST00000543881 UNKQ9C0B0 810 aaKnown RBP11.43□□□□□ -0.58
GABPB1-206ENST00000543881 SPRTNQ9H040 489 aaPredicted RBP11.43□□□□□ -0.58
GABPB1-206ENST00000543881 CHRAC1Q9NRG0 131 aa11.43□□□□□ -0.58
GABPB1-206ENST00000543881 PAK5Q9P286 719 aa11.43□□□□□ -0.58
GABPB1-206ENST00000543881 POLG2Q9UHN1 485 aa11.43□□□□□ -0.58
GABPB1-206ENST00000543881 SEC16AO15027 2179 aa11.43□□□□□ -0.58
GABPB1-206ENST00000543881 FER1L5A0AVI2 2057 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 POLEQ07864 2286 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 SNRNP200O75643 2136 aaKnown RBP11.42□□□□□ -0.58
GABPB1-206ENST00000543881 GPC4O75487 556 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 ALPPP05187 535 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 CBSLP0DN79 551 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 GRNP28799 593 aaKnown RBP11.42□□□□□ -0.58
GABPB1-206ENST00000543881 CBSP35520 551 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 GLRBP48167 497 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 PLOD1Q02809 727 aaPredicted RBP11.42□□□□□ -0.58
GABPB1-206ENST00000543881 HSPA14Q0VDF9 509 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 GRB7Q14451 532 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 RPS6KA1Q15418 735 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 CCNG2Q16589 344 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 IGFL3Q6UXB1 125 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 RAB43Q86YS6 212 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 TMEM151BQ8IW70 566 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 SLC22A15Q8IZD6 547 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 KRT222Q8N1A0 295 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 CCDC89Q8N998 374 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 LINC01555Q8NAE3 123 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 ST6GALNAC3Q8NDV1 305 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 INPP5DQ92835 1189 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 CHRNA10Q9GZZ6 450 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 OR6C2Q9NZP2 312 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 CIDEBQ9UHD4 219 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 NTNG1Q9Y2I2 539 aa11.42□□□□□ -0.58
GABPB1-206ENST00000543881 APCP25054 2843 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 A0A0J9YY10 115 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 LRRTM2O43300 516 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 MAP3K7O43318 606 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 KLF7O75840 302 aaPredicted RBP11.41□□□□□ -0.58
GABPB1-206ENST00000543881 OR2B3O76000 313 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 PKLRP30613 574 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 OTX2P32243 289 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 PER3P56645 1201 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 SESN2P58004 480 aaPredicted RBP11.41□□□□□ -0.58
GABPB1-206ENST00000543881 FOXL2P58012 376 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 PRAMEP78395 509 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 MYBPC3Q14896 1274 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 NCF4Q15080 339 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 ZRSR2Q15696 482 aaKnown RBP11.41□□□□□ -0.58
GABPB1-206ENST00000543881 FASTKD1Q53R41 847 aaKnown RBP11.41□□□□□ -0.58
GABPB1-206ENST00000543881 DNAJC21Q5F1R6 531 aaKnown RBP11.41□□□□□ -0.58
GABPB1-206ENST00000543881 PCID2Q5JVF3 399 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 C1orf189Q5VU69 101 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 SP5Q6BEB4 398 aaPredicted RBP11.41□□□□□ -0.58
GABPB1-206ENST00000543881 NLRP9Q7RTR0 991 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 MRGPREQ86SM8 312 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 HOOK3Q86VS8 718 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 ZADH2Q8N4Q0 377 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 DNAJC22Q8N4W6 341 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 C2orf73Q8N5S3 287 aaPredicted RBP11.41□□□□□ -0.58
GABPB1-206ENST00000543881 CLEC1AQ8NC01 280 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 PPHLN1Q8NEY8 458 aaKnown RBP11.41□□□□□ -0.58
GABPB1-206ENST00000543881 TM9SF4Q92544 642 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 PEX13Q92968 403 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 FER1L6-AS2Q96M78 137 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 TTC1Q99614 292 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 CARD6Q9BX69 1037 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 SLC7A5P2Q9GIP4 190 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 AGPAT4Q9NRZ5 378 aa11.41□□□□□ -0.58
GABPB1-206ENST00000543881 TREX1Q9NSU2 369 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms