RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 HMX2A2RU54 273 aa18.8■□□□□ 0.6
DDX55-207ENST00000540763 GSAPA4D1B5 854 aa18.8■□□□□ 0.6
DDX55-207ENST00000540763 PLD2O14939 933 aa18.8■□□□□ 0.6
DDX55-207ENST00000540763 DXOO77932 396 aaKnown RBP18.8■□□□□ 0.6
DDX55-207ENST00000540763 PRDX3P30048 256 aaKnown RBP18.8■□□□□ 0.6
DDX55-207ENST00000540763 CSTF2P33240 577 aaKnown RBP eCLIP18.8■□□□□ 0.6
DDX55-207ENST00000540763 SERPINB8P50452 374 aa18.8■□□□□ 0.6
DDX55-207ENST00000540763 AP1S2P56377 157 aa18.8■□□□□ 0.6
DDX55-207ENST00000540763 UAP1Q16222 522 aaPredicted RBP18.8■□□□□ 0.6
DDX55-207ENST00000540763 SLC5A12Q1EHB4 618 aa18.8■□□□□ 0.6
DDX55-207ENST00000540763 CCSMST1Q4G0I0 132 aa18.8■□□□□ 0.6
DDX55-207ENST00000540763 CACHD1Q5VU97 1274 aa18.8■□□□□ 0.6
DDX55-207ENST00000540763 ADAMTSL2Q86TH1 951 aa18.8■□□□□ 0.6
DDX55-207ENST00000540763 LSMEM2Q8N112 164 aa18.8■□□□□ 0.6
DDX55-207ENST00000540763 LINC01555Q8NAE3 123 aa18.8■□□□□ 0.6
DDX55-207ENST00000540763 RCBTB1Q8NDN9 531 aa18.8■□□□□ 0.6
DDX55-207ENST00000540763 DENND1AQ8TEH3 1009 aa18.8■□□□□ 0.6
DDX55-207ENST00000540763 ZCCHC14Q8WYQ9 949 aaKnown RBP18.8■□□□□ 0.6
DDX55-207ENST00000540763 UBXN10Q96LJ8 280 aa18.8■□□□□ 0.6
DDX55-207ENST00000540763 CCDC77Q9BR77 488 aa18.8■□□□□ 0.6
DDX55-207ENST00000540763 PARD6BQ9BYG5 372 aa18.8■□□□□ 0.6
DDX55-207ENST00000540763 B3GNT4Q9C0J1 378 aa18.8■□□□□ 0.6
DDX55-207ENST00000540763 SATB2Q9UPW6 733 aa18.8■□□□□ 0.6
DDX55-207ENST00000540763 LOXL2Q9Y4K0 774 aa18.8■□□□□ 0.6
DDX55-207ENST00000540763 ZFYVE26Q68DK2 2539 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 AKAP13Q12802 2813 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 PKD1L2Q7Z442 2459 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 CCDC189A1A4V9 331 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 POC1B-GALNT4F8VUJ3 575 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 PHGDHO43175 533 aaKnown RBP18.79■□□□□ 0.6
DDX55-207ENST00000540763 RASSF9O75901 435 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 MPSTP25325 297 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 PGGT1BP53609 377 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 ATP6V0D1P61421 351 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 PPP1CAP62136 330 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 C3orf38Q5JPI3 329 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 SNAP47Q5SQN1 464 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 LGSNQ5TDP6 509 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 MROH9Q5TGP6 573 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 CYB5D1Q6P9G0 228 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 ADGRD1Q6QNK2 874 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 SPESP1Q6UW49 350 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 FAM92BQ6ZTR7 304 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 MARCH9Q86YJ5 346 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 FBXO39Q8N4B4 442 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 UHMK1Q8TAS1 419 aaKnown RBP18.79■□□□□ 0.6
DDX55-207ENST00000540763 ANKRD49Q8WVL7 239 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 UBLCP1Q8WVY7 318 aaPredicted RBP18.79■□□□□ 0.6
DDX55-207ENST00000540763 DLG3Q92796 817 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 MRRFQ96E11 262 aaKnown RBP18.79■□□□□ 0.6
DDX55-207ENST00000540763 SLC41A2Q96JW4 573 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 CCDC138Q96M89 665 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 PKP4Q99569 1192 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 MAP3K3Q99759 626 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 TRIM54Q9BYV2 358 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 SNX15Q9NRS6 342 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 DKK4Q9UBT3 224 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 KLHL3Q9UH77 587 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 ADAMTS6Q9UKP5 1117 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 PDE10AQ9Y233 779 aa18.79■□□□□ 0.6
DDX55-207ENST00000540763 A0A087X1B8 175 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 A0A1W2PNU3 283 aaPredicted RBP18.78■□□□□ 0.6
DDX55-207ENST00000540763 PABPN1LA6NDY0 278 aaKnown RBP18.78■□□□□ 0.6
DDX55-207ENST00000540763 TRABD2BA6NFA1 517 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 B4E171 279 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 ZBTB11O95625 1053 aaPredicted RBP18.78■□□□□ 0.6
DDX55-207ENST00000540763 SLC16A8O95907 504 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 HIST1H2AGP0C0S8 130 aaPredicted RBP18.78■□□□□ 0.6
DDX55-207ENST00000540763 SLC35E2BP0CK96 405 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 CCDC166P0CW27 439 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 UGT2B7P16662 529 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 HIST1H2ADP20671 130 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 PEBP1P30086 187 aaKnown RBP18.78■□□□□ 0.6
DDX55-207ENST00000540763 TSPAN7P41732 249 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 MAGEA12P43365 314 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 PNLIPRP1P54315 467 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 GABREP78334 506 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 CDKL1Q00532 357 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 SBSNQ6UWP8 590 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 RAPH1Q70E73 1250 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 CMC1Q7Z7K0 106 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 SPNS2Q8IVW8 549 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 FLVCR1-AS1Q8TAF5 88 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 SMPDL3AQ92484 453 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 MTBPQ96DY7 904 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 PRR11Q96HE9 360 aaPredicted RBP18.78■□□□□ 0.6
DDX55-207ENST00000540763 HIST1H2AHQ96KK5 128 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 IL17FQ96PD4 163 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 OR2A14Q96R47 310 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 NRTNQ99748 197 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 HIST1H2AJQ99878 128 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 H2AFJQ9BTM1 129 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 CHRNA10Q9GZZ6 450 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 SPHK1Q9NYA1 384 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 BTRCQ9Y297 605 aa18.78■□□□□ 0.6
DDX55-207ENST00000540763 ASPMQ8IZT6 3477 aa18.77■□□□□ 0.6
DDX55-207ENST00000540763 IGHV5-51A0A0C4DH38 117 aa18.77■□□□□ 0.6
DDX55-207ENST00000540763 A8MU76 341 aa18.77■□□□□ 0.6
DDX55-207ENST00000540763 KIF1CO43896 1103 aaKnown RBP18.77■□□□□ 0.6
DDX55-207ENST00000540763 PRICKLE3O43900 615 aaPredicted RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms