RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 CNTNAP3BQ96NU0 1288 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 PAFAH2Q99487 392 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 CNTNAP3Q9BZ76 1288 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 CCDC86Q9H6F5 360 aaKnown RBP12.4□□□□□ -0.42
VEGFA-224ENST00000523873 GPAMQ9HCL2 828 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 ASCL3Q9NQ33 180 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 ABCF3Q9NUQ8 709 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 SIDT1Q9NXL6 827 aaKnown RBP12.4□□□□□ -0.42
VEGFA-224ENST00000523873 OR6C2Q9NZP2 312 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 AKAP7Q9P0M2 348 aaPredicted RBP12.4□□□□□ -0.42
VEGFA-224ENST00000523873 PDE10AQ9Y233 779 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 KLHL20Q9Y2M5 609 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 PCDHGA8Q9Y5G5 932 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 FER1L5A0AVI2 2057 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 A0A1W2PPV9 198 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 CDC7O00311 574 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 TLX3O43711 291 aaPredicted RBP12.39□□□□□ -0.43
VEGFA-224ENST00000523873 ZBTB14O43829 449 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 KDM1AO60341 852 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 CAPNS1P04632 268 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 EBLN1P0CF75 366 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 FOLR1P15328 257 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 STMN1P16949 149 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 MAP4P27816 1152 aaKnown RBP12.39□□□□□ -0.43
VEGFA-224ENST00000523873 RBMS1P29558 406 aaKnown RBP12.39□□□□□ -0.43
VEGFA-224ENST00000523873 YBX1P67809 324 aaKnown RBP12.39□□□□□ -0.43
VEGFA-224ENST00000523873 FOXM1Q08050 763 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 SLC29A2Q14542 456 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 ZKSCAN8Q15776 578 aaPredicted RBP12.39□□□□□ -0.43
VEGFA-224ENST00000523873 ANKS6Q68DC2 871 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 LRRC8EQ6NSJ5 796 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 SPESP1Q6UW49 350 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 SUSD1Q6UWL2 747 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 DCAKDQ8WVC6 231 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 SLC44A1Q8WWI5 657 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 ZCCHC14Q8WYQ9 949 aaKnown RBP12.39□□□□□ -0.43
VEGFA-224ENST00000523873 UBXN4Q92575 508 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 TSPAN17Q96FV3 270 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 SLC46A1Q96NT5 459 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 CD180Q99467 661 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 TWSG1Q9GZX9 223 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 SYTL2Q9HCH5 934 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 SOHLH2Q9NX45 425 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 SLC39A1Q9NY26 324 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 FOXJ2Q9P0K8 574 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 SPATA7Q9P0W8 599 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 SEMA5BQ9P283 1151 aa12.39□□□□□ -0.43
VEGFA-224ENST00000523873 AKAP13Q12802 2813 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 EXOC1LA0A1B0GW35 172 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 C9orf172C9J069 976 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 TAF4O00268 1085 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 MATN2O00339 956 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 TOX3O15405 576 aaPredicted RBP12.38□□□□□ -0.43
VEGFA-224ENST00000523873 PRICKLE3O43900 615 aaPredicted RBP12.38□□□□□ -0.43
VEGFA-224ENST00000523873 SLC16A8O95907 504 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 C8GP07360 202 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 INHBAP08476 426 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 ABHD2P08910 425 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 ERGP11308 486 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 NELFEP18615 380 aaKnown RBP12.38□□□□□ -0.43
VEGFA-224ENST00000523873 CYP2A7P20853 494 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 GCAP28676 217 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 IMPA1P29218 277 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 MSH2P43246 934 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 ARL4DP49703 201 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 PNLIPRP1P54315 467 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 RAB10P61026 200 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 IRF9Q00978 393 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 DLG1Q12959 904 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 COL9A2Q14055 689 aaPredicted RBP12.38□□□□□ -0.43
VEGFA-224ENST00000523873 CSHL1Q14406 222 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 KIR2DS3Q14952 304 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 GPR19Q15760 415 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 ZIC1Q15915 447 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 CYP2A13Q16696 494 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 TBC1D25Q3MII6 688 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 RAPH1Q70E73 1250 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 RAB42Q8N4Z0 105 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 NKAPQ8N5F7 415 aaKnown RBP12.38□□□□□ -0.43
VEGFA-224ENST00000523873 EIF1ADQ8N9N8 165 aaKnown RBP12.38□□□□□ -0.43
VEGFA-224ENST00000523873 FBXO15Q8NCQ5 510 aaPredicted RBP12.38□□□□□ -0.43
VEGFA-224ENST00000523873 ZNF480Q8WV37 535 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 UBLCP1Q8WVY7 318 aaPredicted RBP12.38□□□□□ -0.43
VEGFA-224ENST00000523873 SLC41A2Q96JW4 573 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 TRAPPC9Q96Q05 1148 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 OR6C1Q96RD1 312 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 ACAT2Q9BWD1 397 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 RAB11FIP5Q9BXF6 653 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 SLC12A9Q9BXP2 914 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 PITPNM3Q9BZ71 974 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 POPDC3Q9HBV1 291 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 C1GALT1Q9NS00 363 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 UTP6Q9NYH9 597 aaKnown RBP12.38□□□□□ -0.43
VEGFA-224ENST00000523873 LNPEPQ9UIQ6 1025 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 B3GALT1Q9Y5Z6 326 aa12.38□□□□□ -0.43
VEGFA-224ENST00000523873 A0A0J9YY10 115 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 CDRT15L2A8MXV6 281 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 B4E171 279 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 SLC16A5O15375 505 aa12.37□□□□□ -0.43
VEGFA-224ENST00000523873 HCRTR1O43613 425 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms