RNA–Protein interactions for RNA: ENST00000517012.1

RNU6-388P-201, Transcript of RNA, U6 small nuclear 388, pseudogene, humanhuman

BASIC

Gene RNU6-388P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-388P-201ENST00000517012 KCND2Q9NZV8 630 aa0.96□□□□□ -2.26
RNU6-388P-201ENST00000517012 LNPEPQ9UIQ6 1025 aa0.96□□□□□ -2.26
RNU6-388P-201ENST00000517012 INTS6Q9UL03 887 aaKnown RBP0.96□□□□□ -2.26
RNU6-388P-201ENST00000517012 HSF4Q9ULV5 492 aa0.96□□□□□ -2.26
RNU6-388P-201ENST00000517012 TMEM8BA6NDV4 472 aa0.95□□□□□ -2.26
RNU6-388P-201ENST00000517012 PLEKHD1A6NEE1 506 aa0.95□□□□□ -2.26
RNU6-388P-201ENST00000517012 G3V2L1 256 aa0.95□□□□□ -2.26
RNU6-388P-201ENST00000517012 WISP3O95389 354 aaPredicted RBP0.95□□□□□ -2.26
RNU6-388P-201ENST00000517012 TRUB2O95900 331 aaKnown RBP0.95□□□□□ -2.26
RNU6-388P-201ENST00000517012 ABCD1P33897 745 aa0.95□□□□□ -2.26
RNU6-388P-201ENST00000517012 RPL21P46778 160 aaKnown RBP0.95□□□□□ -2.26
RNU6-388P-201ENST00000517012 KHDRBS1Q07666 443 aaKnown RBP eCLIP0.95□□□□□ -2.26
RNU6-388P-201ENST00000517012 CDH18Q13634 790 aa0.95□□□□□ -2.26
RNU6-388P-201ENST00000517012 EBI3Q14213 229 aa0.95□□□□□ -2.26
RNU6-388P-201ENST00000517012 SEPT14Q6ZU15 432 aa0.95□□□□□ -2.26
RNU6-388P-201ENST00000517012 MYLK4Q86YV6 388 aaPredicted RBP0.95□□□□□ -2.26
RNU6-388P-201ENST00000517012 OR8K5Q8NH50 307 aa0.95□□□□□ -2.26
RNU6-388P-201ENST00000517012 LINC01006Q8NI28 216 aa0.95□□□□□ -2.26
RNU6-388P-201ENST00000517012 OCR1Q9BZK8 76 aa0.95□□□□□ -2.26
RNU6-388P-201ENST00000517012 SHARPINQ9H0F6 387 aa0.95□□□□□ -2.26
RNU6-388P-201ENST00000517012 CACNG4Q9UBN1 327 aa0.95□□□□□ -2.26
RNU6-388P-201ENST00000517012 KLF18A0A0U1RQI7 1052 aa0.94□□□□□ -2.26
RNU6-388P-201ENST00000517012 EIF3CLB5ME19 914 aaKnown RBP0.94□□□□□ -2.26
RNU6-388P-201ENST00000517012 NXPH4O95158 308 aa0.94□□□□□ -2.26
RNU6-388P-201ENST00000517012 PRKAR1AP10644 381 aa0.94□□□□□ -2.26
RNU6-388P-201ENST00000517012 NR2C1P13056 603 aa0.94□□□□□ -2.26
RNU6-388P-201ENST00000517012 LMO2P25791 158 aa0.94□□□□□ -2.26
RNU6-388P-201ENST00000517012 ABCE1P61221 599 aaKnown RBP0.94□□□□□ -2.26
RNU6-388P-201ENST00000517012 DHODHQ02127 395 aa0.94□□□□□ -2.26
RNU6-388P-201ENST00000517012 DMPKQ09013 629 aa0.94□□□□□ -2.26
RNU6-388P-201ENST00000517012 NAB2Q15742 525 aa0.94□□□□□ -2.26
RNU6-388P-201ENST00000517012 GRTP1Q5TC63 336 aa0.94□□□□□ -2.26
RNU6-388P-201ENST00000517012 HIPK1Q86Z02 1210 aa0.94□□□□□ -2.26
RNU6-388P-201ENST00000517012 TSPYL6Q8N831 410 aa0.94□□□□□ -2.26
RNU6-388P-201ENST00000517012 TRPC4APQ8TEL6 797 aa0.94□□□□□ -2.26
RNU6-388P-201ENST00000517012 FAM122AQ96E09 287 aa0.94□□□□□ -2.26
RNU6-388P-201ENST00000517012 KIF1BPQ96EK5 621 aa0.94□□□□□ -2.26
RNU6-388P-201ENST00000517012 FUZQ9BT04 418 aa0.94□□□□□ -2.26
RNU6-388P-201ENST00000517012 MXD3Q9BW11 206 aa0.94□□□□□ -2.26
RNU6-388P-201ENST00000517012 CNOT8Q9UFF9 292 aaKnown RBP0.94□□□□□ -2.26
RNU6-388P-201ENST00000517012 ZNF541Q9H0D2 1346 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 TENM1Q9UKZ4 2725 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 PINLYPA6NC86 204 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 TSPAN4O14817 238 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 SLC25A12O75746 678 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 HIST1H2ABP04908 130 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 RPS2P15880 293 aaKnown RBP0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 RPL35AP18077 110 aaKnown RBP0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 HIST1H2ADP20671 130 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 PTGER4P35408 488 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 TFAP4Q01664 338 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 NEXNQ0ZGT2 675 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 PNRC1Q12796 327 aaPredicted RBP0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 ITPRIPL2Q3MIP1 535 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 ZNF658BQ4V348 819 aaPredicted RBP0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 LRIF1Q5T3J3 769 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 C9orf66Q5T8R8 295 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 HIST3H2AQ7L7L0 130 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 KRT77Q7Z794 578 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 ENAHQ8N8S7 591 aaPredicted RBP0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 TDRD5Q8NAT2 981 aaKnown RBP0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 PHF10Q8WUB8 498 aaKnown RBP0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 RNF138Q8WVD3 245 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 ZDHHC19Q8WVZ1 309 aaPredicted RBP0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 SGCDQ92629 289 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 STARD4Q96DR4 205 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 C8orf48Q96LL4 319 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 MAPKAP1Q9BPZ7 522 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 URM1Q9BTM9 101 aaKnown RBP0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 CCDC28BQ9BUN5 200 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 NYXQ9GZU5 481 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 S1PR5Q9H228 398 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 RANGRFQ9HD47 186 aaPredicted RBP0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 SPHK1Q9NYA1 384 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 Q9UF83 564 aa0.93□□□□□ -2.26
RNU6-388P-201ENST00000517012 IGHV3-38A0A0C4DH36 116 aa0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 PRSS51A0A1B0GVH4 220 aa0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 NPIPB9F8W1W9 429 aa0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 NDUFS4O43181 175 aa0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 LYPD3O95274 346 aa0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 GPX3P22352 226 aa0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 MSH2P43246 934 aa0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 CTCFP49711 727 aaPredicted RBP0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 F2RL1P55085 397 aa0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 EIF3BP55884 814 aaKnown RBP0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 KRTAP12-3P60328 96 aa0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 TIMM50Q3ZCQ8 353 aa0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 LEKR1Q6ZMV7 388 aa0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 TPRX1Q8N7U7 411 aa0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 TRIML1Q8N9V2 468 aa0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 OR13J1Q8NGT2 312 aa0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 SPPL2AQ8TCT8 520 aa0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 IRGQQ8WZA9 623 aa0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 MMABQ96EY8 250 aaPredicted RBP0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 DGAT2Q96PD7 388 aa0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 NUDCD1Q96RS6 583 aa0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 HNRNPABQ99729 332 aaKnown RBP0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 PIP5K1AQ99755 562 aa0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 C19orf25Q9UFG5 118 aaPredicted RBP0.92□□□□□ -2.26
RNU6-388P-201ENST00000517012 MTUS1Q9ULD2 1270 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms