RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, human

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX41-215	ENST00000512431	ALKBH5	Q6P6C2	394 aa	Known RBP	12.03	□□□□□ -0.48
DDX41-215	ENST00000512431	MEX3B	Q6ZN04	569 aa	Known RBP	12.03	□□□□□ -0.48
DDX41-215	ENST00000512431	COX15	Q7KZN9	410 aa		12.03	□□□□□ -0.48
DDX41-215	ENST00000512431	NDUFAF7	Q7L592	441 aa		12.03	□□□□□ -0.48
DDX41-215	ENST00000512431	NLRP9	Q7RTR0	991 aa		12.03	□□□□□ -0.48
DDX41-215	ENST00000512431	VSIG1	Q86XK7	387 aa		12.03	□□□□□ -0.48
DDX41-215	ENST00000512431	TBC1D21	Q8IYX1	336 aa		12.03	□□□□□ -0.48
DDX41-215	ENST00000512431	SIRT6	Q8N6T7	355 aa		12.03	□□□□□ -0.48
DDX41-215	ENST00000512431	OR5AR1	Q8NGP9	310 aa		12.03	□□□□□ -0.48
DDX41-215	ENST00000512431	TFB1M	Q8WVM0	346 aa	Known RBP	12.03	□□□□□ -0.48
DDX41-215	ENST00000512431	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	12.03	□□□□□ -0.48
DDX41-215	ENST00000512431	MIEF2	Q96C03	454 aa		12.03	□□□□□ -0.48
DDX41-215	ENST00000512431	FCRL5	Q96RD9	977 aa		12.03	□□□□□ -0.48
DDX41-215	ENST00000512431	INTS7	Q9NVH2	962 aa	Known RBP	12.03	□□□□□ -0.48
DDX41-215	ENST00000512431	UVRAG	Q9P2Y5	699 aa		12.03	□□□□□ -0.48
DDX41-215	ENST00000512431	TINAG	Q9UJW2	476 aa		12.03	□□□□□ -0.48
DDX41-215	ENST00000512431	SVIL	O95425	2214 aa		12.03	□□□□□ -0.48
DDX41-215	ENST00000512431	CCDC168	Q8NDH2	2452 aa		12.02	□□□□□ -0.48
DDX41-215	ENST00000512431	VSTM2B	A6NLU5	285 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	AGAP14	A8MT82	685 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	PRAMEF2	O60811	474 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	CRTAM	O95727	393 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	SERPINA7	P05543	415 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	CD68	P34810	354 aa	Predicted RBP	12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	SOX11	P35716	441 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	OR1D4	P47884	311 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	NR2C2	P49116	596 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	CSNK1G2	P78368	415 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	KLC1	Q07866	573 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	STX1A	Q16623	288 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	CNST	Q6PJW8	725 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	SNX20	Q7Z614	316 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	MMP21	Q8N119	569 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	FLVCR1-AS1	Q8TAF5	88 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	ADAMTS18	Q8TE60	1221 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	CA5BP1	Q8WTZ4	195 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	SLC22A18	Q96BI1	424 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	C8orf44	Q96CB5	159 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	VAT1	Q99536	393 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	FAM96A	Q9H5X1	160 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	ZNF304	Q9HCX3	659 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	ZDHHC3	Q9NYG2	299 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	ZNF282	Q9UDV7	671 aa	Predicted RBP	12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	C3orf18	Q9UK00	162 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	MEMO1	Q9Y316	297 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	MAU2	Q9Y6X3	613 aa		12.02	□□□□□ -0.49
DDX41-215	ENST00000512431	PKDREJ	Q9NTG1	2253 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431		A0A087X0T9	212 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	OR5H15	A6NDH6	313 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	LIN7A	O14910	233 aa	Predicted RBP	12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	FAM155B	O75949	473 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	WDPCP	O95876	746 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	SERPING1	P05155	500 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	H2AFZ	P0C0S5	128 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	ZGLP1	P0C6A0	271 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	FAM228B	P0C875	321 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	MAG	P20916	626 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	GCGR	P47871	477 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	XIAP	P98170	497 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	SRSF11	Q05519	484 aa	Known RBP	12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	GPR33	Q49SQ1	333 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	KRTCAP3	Q53RY4	240 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	ABHD17B	Q5VST6	288 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	ATG9B	Q674R7	924 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	RIPOR1	Q6ZS17	1223 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	H2AFV	Q71UI9	128 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	SPPL2C	Q8IUH8	684 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	PRSS58	Q8IYP2	241 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	METTL27	Q8N6F8	245 aa	Predicted RBP	12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	OR5K2	Q8NHB8	316 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	STT3B	Q8TCJ2	826 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	PSMF1	Q92530	271 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	OXNAD1	Q96HP4	312 aa	Predicted RBP	12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	SELENOS	Q9BQE4	189 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	RNF32	Q9H0A6	362 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	ENKD1	Q9H0I2	346 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	LUC7L	Q9NQ29	371 aa	Known RBP	12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	STMN3	Q9NZ72	180 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	RSPH14	Q9UHP6	348 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	TEKT2	Q9UIF3	430 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	KLHL20	Q9Y2M5	609 aa		12.01	□□□□□ -0.49
DDX41-215	ENST00000512431	FAM221A	A4D161	298 aa		12	□□□□□ -0.49
DDX41-215	ENST00000512431	FAM227A	F5H4B4	570 aa		12	□□□□□ -0.49
DDX41-215	ENST00000512431	AP2A1	O95782	977 aa		12	□□□□□ -0.49
DDX41-215	ENST00000512431	AGT	P01019	485 aa		12	□□□□□ -0.49
DDX41-215	ENST00000512431	ICAM2	P13598	275 aa		12	□□□□□ -0.49
DDX41-215	ENST00000512431	DRD2	P14416	443 aa		12	□□□□□ -0.49
DDX41-215	ENST00000512431	GEM	P55040	296 aa		12	□□□□□ -0.49
DDX41-215	ENST00000512431	CACNG1	Q06432	222 aa		12	□□□□□ -0.49
DDX41-215	ENST00000512431	WASHC5	Q12768	1159 aa		12	□□□□□ -0.49
DDX41-215	ENST00000512431	MESD	Q14696	234 aa		12	□□□□□ -0.49
DDX41-215	ENST00000512431	ZNF658B	Q4V348	819 aa	Predicted RBP	12	□□□□□ -0.49
DDX41-215	ENST00000512431	HIBCH	Q6NVY1	386 aa	Predicted RBP	12	□□□□□ -0.49
DDX41-215	ENST00000512431	PRMT9	Q6P2P2	845 aa		12	□□□□□ -0.49
DDX41-215	ENST00000512431	TAS2R42	Q7RTR8	314 aa		12	□□□□□ -0.49
DDX41-215	ENST00000512431	TMTC1	Q8IUR5	882 aa		12	□□□□□ -0.49
DDX41-215	ENST00000512431	EID3	Q8N140	333 aa		12	□□□□□ -0.49
DDX41-215	ENST00000512431	CHDH	Q8NE62	594 aa	Predicted RBP	12	□□□□□ -0.49

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