RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 USP10Q14694 798 aaKnown RBP14.51□□□□□ -0.09
RNF4-210ENST00000508235 SLC5A12Q1EHB4 618 aa14.51□□□□□ -0.09
RNF4-210ENST00000508235 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.51□□□□□ -0.09
RNF4-210ENST00000508235 CEACAM20Q6UY09 585 aa14.51□□□□□ -0.09
RNF4-210ENST00000508235 PIWIL4Q7Z3Z4 852 aaKnown RBP14.51□□□□□ -0.09
RNF4-210ENST00000508235 BPHLQ86WA6 291 aaPredicted RBP14.51□□□□□ -0.09
RNF4-210ENST00000508235 BMPERQ8N8U9 685 aa14.51□□□□□ -0.09
RNF4-210ENST00000508235 USP7Q93009 1102 aa14.51□□□□□ -0.09
RNF4-210ENST00000508235 HIST1H2AHQ96KK5 128 aa14.51□□□□□ -0.09
RNF4-210ENST00000508235 OR2A14Q96R47 310 aa14.51□□□□□ -0.09
RNF4-210ENST00000508235 HIST1H2AJQ99878 128 aa14.51□□□□□ -0.09
RNF4-210ENST00000508235 H2AFJQ9BTM1 129 aa14.51□□□□□ -0.09
RNF4-210ENST00000508235 TWSG1Q9GZX9 223 aa14.51□□□□□ -0.09
RNF4-210ENST00000508235 PARVBQ9HBI1 364 aa14.51□□□□□ -0.09
RNF4-210ENST00000508235 GPAMQ9HCL2 828 aa14.51□□□□□ -0.09
RNF4-210ENST00000508235 INTS7Q9NVH2 962 aaKnown RBP14.51□□□□□ -0.09
RNF4-210ENST00000508235 OCIAD1Q9NX40 245 aa14.51□□□□□ -0.09
RNF4-210ENST00000508235 SOHLH2Q9NX45 425 aa14.51□□□□□ -0.09
RNF4-210ENST00000508235 PCDHGA3Q9Y5H0 932 aa14.51□□□□□ -0.09
RNF4-210ENST00000508235 IKBKGQ9Y6K9 419 aa14.51□□□□□ -0.09
RNF4-210ENST00000508235 PCM1Q15154 2024 aa14.51□□□□□ -0.09
RNF4-210ENST00000508235 ADAMTS20P59510 1910 aa14.51□□□□□ -0.09
RNF4-210ENST00000508235 PMS2P1A4D2B8 440 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 POLR1CO15160 346 aaPredicted RBP14.5□□□□□ -0.09
RNF4-210ENST00000508235 SYF2O95926 243 aaKnown RBP14.5□□□□□ -0.09
RNF4-210ENST00000508235 CAPNS1P04632 268 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 ABHD2P08910 425 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 ENO2P09104 434 aaPredicted RBP14.5□□□□□ -0.09
RNF4-210ENST00000508235 ERGP11308 486 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 SLC5A2P31639 672 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 ETV5P41161 510 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 PMS2P54278 862 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 FOXM1Q08050 763 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 NAA25Q14CX7 972 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 CYP2A13Q16696 494 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 CCSMST1Q4G0I0 132 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 TAOK1Q7L7X3 1001 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 CCDC91Q7Z6B0 441 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 PROSER1Q86XN7 944 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 RASGRP3Q8IV61 690 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 CNPY4Q8N129 248 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 D2HGDHQ8N465 521 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 LINC01555Q8NAE3 123 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 SNIP1Q8TAD8 396 aaKnown RBP14.5□□□□□ -0.09
RNF4-210ENST00000508235 SMPDL3AQ92484 453 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 CNTNAP3BQ96NU0 1288 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 IL17FQ96PD4 163 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 PKP4Q99569 1192 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 SLC12A9Q9BXP2 914 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 CNTNAP3Q9BZ76 1288 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 PDE7BQ9NP56 450 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 SIDT1Q9NXL6 827 aaKnown RBP14.5□□□□□ -0.09
RNF4-210ENST00000508235 ACSL6Q9UKU0 697 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 BTRCQ9Y297 605 aa14.5□□□□□ -0.09
RNF4-210ENST00000508235 MTO1Q9Y2Z2 717 aaKnown RBP14.5□□□□□ -0.09
RNF4-210ENST00000508235 A0A0J9YY10 115 aa14.49□□□□□ -0.09
RNF4-210ENST00000508235 SLC9B1P1A6NJY1 282 aa14.49□□□□□ -0.09
RNF4-210ENST00000508235 PRAMEF10O60809 474 aa14.49□□□□□ -0.09
RNF4-210ENST00000508235 TSPAN12O95859 305 aa14.49□□□□□ -0.09
RNF4-210ENST00000508235 INHBAP08476 426 aa14.49□□□□□ -0.09
RNF4-210ENST00000508235 OAS2P29728 719 aaKnown RBP14.49□□□□□ -0.09
RNF4-210ENST00000508235 PNLIPRP1P54315 467 aa14.49□□□□□ -0.09
RNF4-210ENST00000508235 AP1S2P56377 157 aa14.49□□□□□ -0.09
RNF4-210ENST00000508235 RAB10P61026 200 aa14.49□□□□□ -0.09
RNF4-210ENST00000508235 EFTUD2Q15029 972 aaKnown RBP eCLIP14.49□□□□□ -0.095e-7■■■□□ 16.3
RNF4-210ENST00000508235 FBXO38Q6PIJ6 1188 aa14.49□□□□□ -0.09
RNF4-210ENST00000508235 ZNF248Q8NDW4 579 aa14.49□□□□□ -0.09
RNF4-210ENST00000508235 OR8K5Q8NH50 307 aa14.49□□□□□ -0.09
RNF4-210ENST00000508235 DENND1AQ8TEH3 1009 aa14.49□□□□□ -0.09
RNF4-210ENST00000508235 TCTN2Q96GX1 697 aa14.49□□□□□ -0.09
RNF4-210ENST00000508235 CCDC138Q96M89 665 aa14.49□□□□□ -0.09
RNF4-210ENST00000508235 TRAPPC9Q96Q05 1148 aa14.49□□□□□ -0.09
RNF4-210ENST00000508235 OR6C1Q96RD1 312 aa14.49□□□□□ -0.09
RNF4-210ENST00000508235 NRTNQ99748 197 aa14.49□□□□□ -0.09
RNF4-210ENST00000508235 FANCEQ9HB96 536 aa14.49□□□□□ -0.09
RNF4-210ENST00000508235 SPHK1Q9NYA1 384 aa14.49□□□□□ -0.09
RNF4-210ENST00000508235 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.49□□□□□ -0.09
RNF4-210ENST00000508235 CIDEBQ9UHD4 219 aa14.49□□□□□ -0.09
RNF4-210ENST00000508235 NOVA2Q9UNW9 492 aaKnown RBP14.49□□□□□ -0.09
RNF4-210ENST00000508235 RRP8O43159 456 aaKnown RBP14.48□□□□□ -0.09
RNF4-210ENST00000508235 FAM155BO75949 473 aa14.48□□□□□ -0.09
RNF4-210ENST00000508235 SLC16A8O95907 504 aa14.48□□□□□ -0.09
RNF4-210ENST00000508235 MSL3P1P0C860 447 aa14.48□□□□□ -0.09
RNF4-210ENST00000508235 CNTFP26441 200 aa14.48□□□□□ -0.09
RNF4-210ENST00000508235 CRABP2P29373 138 aa14.48□□□□□ -0.09
RNF4-210ENST00000508235 SERPINB9P50453 376 aa14.48□□□□□ -0.09
RNF4-210ENST00000508235 TUBB3Q13509 450 aa14.48□□□□□ -0.09
RNF4-210ENST00000508235 SF1Q15637 639 aaKnown RBP14.48□□□□□ -0.09
RNF4-210ENST00000508235 ZKSCAN8Q15776 578 aaPredicted RBP14.48□□□□□ -0.09
RNF4-210ENST00000508235 UAP1Q16222 522 aaPredicted RBP14.48□□□□□ -0.09
RNF4-210ENST00000508235 TMEM207Q6UWW9 146 aa14.48□□□□□ -0.09
RNF4-210ENST00000508235 RAPH1Q70E73 1250 aa14.48□□□□□ -0.09
RNF4-210ENST00000508235 PPP1R3BQ86XI6 285 aa14.48□□□□□ -0.09
RNF4-210ENST00000508235 CEP97Q8IW35 865 aa14.48□□□□□ -0.09
RNF4-210ENST00000508235 SYTL1Q8IYJ3 562 aa14.48□□□□□ -0.09
RNF4-210ENST00000508235 C19orf47Q8N9M1 422 aaKnown RBP14.48□□□□□ -0.09
RNF4-210ENST00000508235 FLVCR1-AS1Q8TAF5 88 aa14.48□□□□□ -0.09
RNF4-210ENST00000508235 FCRL4Q96PJ5 515 aa14.48□□□□□ -0.09
RNF4-210ENST00000508235 DERL2Q9GZP9 239 aa14.48□□□□□ -0.09
RNF4-210ENST00000508235 CHRNA10Q9GZZ6 450 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms