RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.25■□□□□ 0.83
VSX1-206ENST00000444511 SLC39A10Q9ULF5 831 aa20.25■□□□□ 0.83
VSX1-206ENST00000444511 KLHL20Q9Y2M5 609 aa20.25■□□□□ 0.83
VSX1-206ENST00000444511 SPENQ96T58 3664 aaKnown RBP20.25■□□□□ 0.83
VSX1-206ENST00000444511 TNRC6AQ8NDV7 1962 aaKnown RBP20.25■□□□□ 0.83
VSX1-206ENST00000444511 SORBS2O94875 1100 aaKnown RBP20.24■□□□□ 0.83
VSX1-206ENST00000444511 S1PR4O95977 384 aa20.24■□□□□ 0.83
VSX1-206ENST00000444511 CRADDP78560 199 aa20.24■□□□□ 0.83
VSX1-206ENST00000444511 BASP1P80723 227 aaKnown RBP20.24■□□□□ 0.83
VSX1-206ENST00000444511 RAPSNQ13702 412 aa20.24■□□□□ 0.83
VSX1-206ENST00000444511 NKAIN1Q4KMZ8 207 aa20.24■□□□□ 0.83
VSX1-206ENST00000444511 JMJD6Q6NYC1 403 aaPredicted RBP20.24■□□□□ 0.83
VSX1-206ENST00000444511 TTC23LQ6PF05 361 aa20.24■□□□□ 0.83
VSX1-206ENST00000444511 C4orf22Q6V702 233 aa20.24■□□□□ 0.83
VSX1-206ENST00000444511 GSTA5Q7RTV2 222 aa20.24■□□□□ 0.83
VSX1-206ENST00000444511 TAX1BP1Q86VP1 789 aa20.24■□□□□ 0.83
VSX1-206ENST00000444511 CLEC1AQ8NC01 280 aa20.24■□□□□ 0.83
VSX1-206ENST00000444511 OR2Y1Q8NGV0 311 aa20.24■□□□□ 0.83
VSX1-206ENST00000444511 FER1L6-AS2Q96M78 137 aa20.24■□□□□ 0.83
VSX1-206ENST00000444511 IL17FQ96PD4 163 aa20.24■□□□□ 0.83
VSX1-206ENST00000444511 PANX3Q96QZ0 392 aa20.24■□□□□ 0.83
VSX1-206ENST00000444511 IL22Q9GZX6 179 aa20.24■□□□□ 0.83
VSX1-206ENST00000444511 SLAMF7Q9NQ25 335 aa20.24■□□□□ 0.83
VSX1-206ENST00000444511 INTS7Q9NVH2 962 aaKnown RBP20.24■□□□□ 0.83
VSX1-206ENST00000444511 GNPTGQ9UJJ9 305 aa20.24■□□□□ 0.83
VSX1-206ENST00000444511 MAP4K5Q9Y4K4 846 aa20.24■□□□□ 0.83
VSX1-206ENST00000444511 COL12A1Q99715 3063 aa20.23■□□□□ 0.83
VSX1-206ENST00000444511 AP3B1O00203 1094 aa20.23■□□□□ 0.83
VSX1-206ENST00000444511 NDUFS3O75489 264 aa20.23■□□□□ 0.83
VSX1-206ENST00000444511 SLCO2B1O94956 709 aa20.23■□□□□ 0.83
VSX1-206ENST00000444511 IGHEP01854 428 aa20.23■□□□□ 0.83
VSX1-206ENST00000444511 ALAS2P22557 587 aa20.23■□□□□ 0.83
VSX1-206ENST00000444511 GNLYP22749 145 aa20.23■□□□□ 0.83
VSX1-206ENST00000444511 UQCRFS1P47985 274 aa20.23■□□□□ 0.83
VSX1-206ENST00000444511 GRB7Q14451 532 aa20.23■□□□□ 0.83
VSX1-206ENST00000444511 SIX1Q15475 284 aaPredicted RBP20.23■□□□□ 0.83
VSX1-206ENST00000444511 DRICH1Q6PGQ1 229 aaPredicted RBP20.23■□□□□ 0.83
VSX1-206ENST00000444511 MCATQ8IVS2 390 aaKnown RBP20.23■□□□□ 0.83
VSX1-206ENST00000444511 MPP5Q8N3R9 675 aa20.23■□□□□ 0.83
VSX1-206ENST00000444511 OTUD6BQ8N6M0 293 aa20.23■□□□□ 0.83
VSX1-206ENST00000444511 LMNTD1Q8N9Z9 388 aa20.23■□□□□ 0.83
VSX1-206ENST00000444511 OR2L8Q8NGY9 312 aa20.23■□□□□ 0.83
VSX1-206ENST00000444511 SKA2Q8WVK7 121 aaPredicted RBP20.23■□□□□ 0.83
VSX1-206ENST00000444511 DLG3Q92796 817 aa20.23■□□□□ 0.83
VSX1-206ENST00000444511 SMAD5Q99717 465 aaKnown RBP20.23■□□□□ 0.83
VSX1-206ENST00000444511 MENTQ9BUN1 341 aa20.23■□□□□ 0.83
VSX1-206ENST00000444511 TREX1Q9NSU2 369 aa20.23■□□□□ 0.83
VSX1-206ENST00000444511 BFARQ9NZS9 450 aa20.23■□□□□ 0.83
VSX1-206ENST00000444511 LUZP4Q9P127 313 aa20.23■□□□□ 0.83
VSX1-206ENST00000444511 DRG1Q9Y295 367 aaKnown RBP20.23■□□□□ 0.83
VSX1-206ENST00000444511 DOPEY2Q9Y3R5 2298 aa20.23■□□□□ 0.83
VSX1-206ENST00000444511 MAST4O15021 2626 aa20.22■□□□□ 0.83
VSX1-206ENST00000444511 RASGRF2O14827 1237 aa20.22■□□□□ 0.83
VSX1-206ENST00000444511 KPNA5O15131 536 aa20.22■□□□□ 0.83
VSX1-206ENST00000444511 NPY2RP49146 381 aa20.22■□□□□ 0.83
VSX1-206ENST00000444511 ARSFP54793 590 aa20.22■□□□□ 0.83
VSX1-206ENST00000444511 SF1Q15637 639 aaKnown RBP20.22■□□□□ 0.83
VSX1-206ENST00000444511 INPP5JQ15735 1006 aaPredicted RBP20.22■□□□□ 0.83
VSX1-206ENST00000444511 VWA5B1Q5TIE3 1220 aa20.22■□□□□ 0.83
VSX1-206ENST00000444511 SLC6A19Q695T7 634 aa20.22■□□□□ 0.83
VSX1-206ENST00000444511 OTOAQ7RTW8 1153 aa20.22■□□□□ 0.83
VSX1-206ENST00000444511 LRRC6Q86X45 466 aa20.22■□□□□ 0.83
VSX1-206ENST00000444511 DENND1AQ8TEH3 1009 aa20.22■□□□□ 0.83
VSX1-206ENST00000444511 MAIP1Q8WWC4 291 aa20.22■□□□□ 0.83
VSX1-206ENST00000444511 PTERQ96BW5 349 aa20.22■□□□□ 0.83
VSX1-206ENST00000444511 RAB11FIP5Q9BXF6 653 aa20.22■□□□□ 0.83
VSX1-206ENST00000444511 P2RY12Q9H244 342 aa20.22■□□□□ 0.83
VSX1-206ENST00000444511 ZKSCAN5Q9Y2L8 839 aa20.22■□□□□ 0.83
VSX1-206ENST00000444511 LRRK2Q5S007 2527 aa20.21■□□□□ 0.83
VSX1-206ENST00000444511 FGGP02679 453 aa20.21■□□□□ 0.83
VSX1-206ENST00000444511 GP1BBP13224 206 aa20.21■□□□□ 0.83
VSX1-206ENST00000444511 NMBRP28336 390 aa20.21■□□□□ 0.83
VSX1-206ENST00000444511 ZC3H12BQ5HYM0 836 aaKnown RBP20.21■□□□□ 0.83
VSX1-206ENST00000444511 DCAF10Q5QP82 559 aa20.21■□□□□ 0.83
VSX1-206ENST00000444511 MRPL14Q6P1L8 145 aaKnown RBP20.21■□□□□ 0.83
VSX1-206ENST00000444511 TTLL10Q6ZVT0 673 aa20.21■□□□□ 0.83
VSX1-206ENST00000444511 RAB42Q8N4Z0 105 aa20.21■□□□□ 0.83
VSX1-206ENST00000444511 RBMXL3Q8N7X1 1067 aaKnown RBP20.21■□□□□ 0.83
VSX1-206ENST00000444511 PNPLA2Q96AD5 504 aa20.21■□□□□ 0.83
VSX1-206ENST00000444511 RAD51AP1Q96B01 352 aa20.21■□□□□ 0.83
VSX1-206ENST00000444511 LZTFL1Q9NQ48 299 aa20.21■□□□□ 0.83
VSX1-206ENST00000444511 P4HTMQ9NXG6 502 aa20.21■□□□□ 0.83
VSX1-206ENST00000444511 C5AR2Q9P296 337 aa20.21■□□□□ 0.83
VSX1-206ENST00000444511 MAP10Q9P2G4 905 aa20.21■□□□□ 0.83
VSX1-206ENST00000444511 TTC7AQ9ULT0 858 aaPredicted RBP20.21■□□□□ 0.83
VSX1-206ENST00000444511 MRFAP1Q9Y605 127 aa20.21■□□□□ 0.83
VSX1-206ENST00000444511 MED13Q9UHV7 2174 aa20.21■□□□□ 0.83
VSX1-206ENST00000444511 A0A1B0GX78 115 aa20.2■□□□□ 0.82
VSX1-206ENST00000444511 BLACEA4D250 179 aa20.2■□□□□ 0.82
VSX1-206ENST00000444511 CNOT3O75175 753 aaKnown RBP20.2■□□□□ 0.82
VSX1-206ENST00000444511 ALPPP05187 535 aa20.2■□□□□ 0.82
VSX1-206ENST00000444511 RPS3P23396 243 aaKnown RBP eCLIP20.2■□□□□ 0.82
VSX1-206ENST00000444511 GRIA3P42263 894 aa20.2■□□□□ 0.82
VSX1-206ENST00000444511 EIF3BP55884 814 aaKnown RBP20.2■□□□□ 0.82
VSX1-206ENST00000444511 CYP2A13Q16696 494 aa20.2■□□□□ 0.82
VSX1-206ENST00000444511 FHL5Q5TD97 284 aa20.2■□□□□ 0.82
VSX1-206ENST00000444511 FIGLAQ6QHK4 219 aa20.2■□□□□ 0.82
VSX1-206ENST00000444511 GALNT16Q8N428 558 aa20.2■□□□□ 0.82
VSX1-206ENST00000444511 Q8NA96 180 aa20.2■□□□□ 0.82
VSX1-206ENST00000444511 FOPNLQ96NB1 174 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms