RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 TSPYL5Q86VY4 417 aaPredicted RBP12.51□□□□□ -0.41
HERC3-203ENST00000407637 FAM72BQ86X60 149 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 KIF18BQ86Y91 864 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 P3H2Q8IVL5 708 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 FAM126BQ8IXS8 530 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 ENTHD1Q8IYW4 607 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 ENKURQ8TC29 256 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 ST8SIA2Q92186 375 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 NDRG1Q92597 394 aaKnown RBP12.51□□□□□ -0.41
HERC3-203ENST00000407637 GPRASP2Q96D09 838 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 PABPC5Q96DU9 382 aaKnown RBP12.51□□□□□ -0.41
HERC3-203ENST00000407637 CAMKK2Q96RR4 588 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 TSEN34Q9BSV6 310 aaKnown RBP12.51□□□□□ -0.41
HERC3-203ENST00000407637 THUMPD3Q9BV44 507 aaKnown RBP12.51□□□□□ -0.41
HERC3-203ENST00000407637 PPIL3Q9H2H8 161 aaKnown RBP12.51□□□□□ -0.41
HERC3-203ENST00000407637 TDRD3Q9H7E2 651 aaKnown RBP12.51□□□□□ -0.41
HERC3-203ENST00000407637 MCUBQ9NWR8 336 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 ING3Q9NXR8 418 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 CPNE7Q9UBL6 633 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 EFCAB10A6NFE3 127 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 B4GALT5O43286 388 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 PI15O43692 258 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 VPS4BO75351 444 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 WDR47O94967 919 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 SERPINA1P01009 418 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 NPPAP01160 153 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 CHRNA4P43681 627 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 NUDT6P53370 316 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 PRKG2Q13237 762 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 RGMBQ6NW40 437 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 KDELC1Q6UW63 502 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 TLK2Q86UE8 772 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 AADATQ8N5Z0 425 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 BARHL1Q9BZE3 327 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 PPA2Q9H2U2 334 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 CATSPERBQ9H7T0 1116 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 ELF5Q9UKW6 265 aaPredicted RBP12.5□□□□□ -0.41
HERC3-203ENST00000407637 A0A075B6Q4 140 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 ARPC4-TTLL3A0A0A6YYG9 625 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 RGS20O76081 388 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 CD72P21854 359 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 PRDX3P30048 256 aaKnown RBP12.5□□□□□ -0.41
HERC3-203ENST00000407637 HMGCLP35914 325 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 TGM4P49221 684 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 CPT1AP50416 773 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 BTN1A1Q13410 526 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 RIN1Q13671 783 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 SUPT20HL1Q3ZLR7 823 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 FLYWCH1Q4VC44 716 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 KDELC2Q7Z4H8 507 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 LDB1Q86U70 411 aaPredicted RBP12.5□□□□□ -0.41
HERC3-203ENST00000407637 RIT1Q92963 219 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 MAGEB10Q96LZ2 347 aaPredicted RBP12.5□□□□□ -0.41
HERC3-203ENST00000407637 TMEM209Q96SK2 561 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 TBL1YQ9BQ87 522 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 CCSER2Q9H7U1 834 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 RPF1Q9H9Y2 349 aaKnown RBP12.5□□□□□ -0.41
HERC3-203ENST00000407637 C3orf14Q9HBI5 128 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 FARSBQ9NSD9 589 aaKnown RBP12.5□□□□□ -0.41
HERC3-203ENST00000407637 TAS2R16Q9NYV7 291 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 ZIM2Q9NZV7 527 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 KIF17Q9P2E2 1029 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 A0A0G2JMZ2 1700 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 LRRC37A2A6NM11 1700 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 LRRC37AA6NMS7 1700 aa12.5□□□□□ -0.41
HERC3-203ENST00000407637 TRAV19A0A0A6YYK7 116 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 ELOVL7A1L3X0 281 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 DIRAS1O95057 198 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 VIPP01282 170 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 IFNA16P05015 189 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 STSP08842 583 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 CSF3P09919 207 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 CHMP24386 653 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 GMPSP49915 693 aaPredicted RBP12.49□□□□□ -0.41
HERC3-203ENST00000407637 CLCN5P51795 746 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 ZNF33BQ06732 778 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 PWP1Q13610 501 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 CRY2Q49AN0 593 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 IGSF11Q5DX21 431 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 TEX261Q6UWH6 196 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 MPZL3Q6UWV2 235 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 LIPIQ6XZB0 460 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 Q6ZPB1 254 aaPredicted RBP12.49□□□□□ -0.41
HERC3-203ENST00000407637 CFAP77Q6ZQR2 320 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 RAB44Q7Z6P3 723 aaPredicted RBP12.49□□□□□ -0.41
HERC3-203ENST00000407637 TIGD4Q8IY51 512 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 C7orf31Q8N865 590 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 ZNF366Q8N895 744 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 ZNF680Q8NEM1 530 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 OR7D4Q8NG98 312 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 TSPAN17Q96FV3 270 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 TBATAQ96M53 351 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 FICDQ9BVA6 458 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 GABARAPL1Q9H0R8 117 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 SPNS1Q9H2V7 528 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 PSORS1C1Q9UIG5 152 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 DNMT3AQ9Y6K1 912 aaPredicted RBP12.49□□□□□ -0.41
HERC3-203ENST00000407637 U3KQ87 197 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 SCN1AP35498 2009 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 UBA6A0AVT1 1052 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms